Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10489830	0.81[JPT][hapmap]
rs10489831	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11264979	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12082921	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12118413	0.82[JPT][hapmap]
rs12131165	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12725721	0.81[JPT][hapmap]
rs12728815	0.81[JPT][hapmap]
rs12729052	0.87[JPT][hapmap]
rs12738597	0.83[JPT][hapmap]
rs1342941	0.83[JPT][hapmap]
rs1342942	0.83[JPT][hapmap]
rs1548355	0.94[JPT][hapmap]
rs17628151	0.81[JPT][hapmap]
rs1894039	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2106084	0.81[JPT][hapmap]
rs2213946	0.83[JPT][hapmap]
rs36123399	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3820678	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs961562	0.81[JPT][hapmap]
rs989203	0.81[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470743	chr1:158484285-158521392	Weak transcription Enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv547982	chr1:158489945-158511445	Enhancers Weak transcription Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv946441	chr1:158493644-158505509	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv547983	chr1:158495464-158523671	Enhancers Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:158504200-158504800	Enhancers	K562	blood
2	chr1:158504200-158505000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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