| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1035785 |
chr15:54951691-55266222 |
Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv542390 |
chr15:54951691-55266222 |
Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1043176 |
chr15:55010228-55563000 |
Genic enhancers Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
21 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1042741 |
chr15:55068022-55622497 |
Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
31 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1047424 |
chr15:55098585-55243518 |
Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv833014 |
chr15:55099183-55249491 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1039471 |
chr15:55137606-55552555 |
Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv904239 |
chr15:55141265-55272996 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv569520 |
chr15:55170999-55327439 |
Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv904240 |
chr15:55177426-55233979 |
ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv1541 |
chr15:55190471-55247202 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv510661 |
chr15:55207518-55226757 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page:
1
