Variant report
| Variant | rs112872319 |
|---|---|
| Chromosome Location | chr15:59507164-59507165 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:59467800-59523200 | Weak transcription | Fetal Brain Female | brain |
| 2 | chr15:59468200-59528600 | Weak transcription | Stomach Mucosa | stomach |
| 3 | chr15:59468600-59521400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 4 | chr15:59475800-59517800 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 5 | chr15:59480200-59507200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 6 | chr15:59480600-59507600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 7 | chr15:59483200-59514000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 8 | chr15:59485400-59515400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 9 | chr15:59485600-59521200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 10 | chr15:59487800-59524400 | Weak transcription | Small Intestine | intestine |
| 11 | chr15:59489800-59512600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 12 | chr15:59489800-59515600 | Weak transcription | Right Atrium | heart |
| 13 | chr15:59490200-59510800 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 14 | chr15:59492000-59521600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 15 | chr15:59493000-59512000 | Strong transcription | HSMM | muscle |
| 16 | chr15:59493000-59513800 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 17 | chr15:59493200-59513600 | Strong transcription | Osteobl | bone |
| 18 | chr15:59493200-59513800 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 19 | chr15:59493200-59514400 | Strong transcription | HMEC | breast |
| 20 | chr15:59493200-59523200 | Strong transcription | Hela-S3 | cervix |
| 21 | chr15:59494800-59514200 | Strong transcription | A549 | lung |
| 22 | chr15:59496800-59515200 | Weak transcription | Spleen | Spleen |
| 23 | chr15:59496800-59515600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr15:59496800-59522000 | Strong transcription | NHEK | skin |
| 25 | chr15:59497000-59514600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr15:59497000-59524800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 27 | chr15:59497200-59517600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr15:59498000-59516000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 29 | chr15:59498800-59522000 | Strong transcription | GM12878-XiMat | blood |
| 30 | chr15:59499200-59512600 | Strong transcription | Fetal Intestine Large | intestine |
| 31 | chr15:59499400-59507600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 32 | chr15:59499600-59507200 | Weak transcription | NHLF | lung |
| 33 | chr15:59500000-59509200 | Weak transcription | Psoas Muscle | Psoas |
| 34 | chr15:59500000-59509600 | Weak transcription | Esophagus | oesophagus |
| 35 | chr15:59500000-59513600 | Weak transcription | Fetal Kidney | kidney |
| 36 | chr15:59500000-59515000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 37 | chr15:59500000-59515000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr15:59500000-59517600 | Weak transcription | Fetal Lung | lung |
| 39 | chr15:59500000-59524400 | Weak transcription | Right Ventricle | heart |
| 40 | chr15:59500200-59508000 | Weak transcription | Fetal Heart | heart |
| 41 | chr15:59500600-59524600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 42 | chr15:59501000-59509200 | Weak transcription | Colon Smooth Muscle | Colon |
| 43 | chr15:59501200-59507600 | Weak transcription | Left Ventricle | heart |
| 44 | chr15:59501200-59507800 | Weak transcription | Fetal Muscle Leg | muscle |
| 45 | chr15:59501200-59509200 | Weak transcription | Fetal Stomach | stomach |
| 46 | chr15:59501200-59509800 | Weak transcription | Lung | lung |
| 47 | chr15:59501200-59510400 | Weak transcription | Brain Angular Gyrus | brain |
| 48 | chr15:59501200-59514200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 49 | chr15:59501200-59515000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 50 | chr15:59501200-59515000 | Weak transcription | Pancreas | Pancrea |
