Variant report

Variant	rs112963826
Chromosome Location	chr8:66533915-66533916
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66532234..66535981-chr8:66546059..66548222,3	K562	blood:
2	chr8:66532015..66534641-chr8:66544664..66547461,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000104442	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761434	chr8:65578467-66567678	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv398351	chr8:66533044-66535247	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66504000-66545200	Weak transcription	Fetal Brain Male	brain
2	chr8:66506800-66545200	Weak transcription	Stomach Mucosa	stomach
3	chr8:66507800-66538000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:66508000-66545200	Weak transcription	Fetal Heart	heart
5	chr8:66514600-66539200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr8:66517000-66538400	Weak transcription	Small Intestine	intestine
7	chr8:66517200-66539000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr8:66518000-66545600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr8:66519600-66545200	Weak transcription	Right Atrium	heart
10	chr8:66520000-66545000	Weak transcription	NHEK	skin
11	chr8:66520400-66539600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr8:66522200-66535200	Strong transcription	Sigmoid Colon	Sigmoid Colon
13	chr8:66522600-66545200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr8:66524800-66538400	Weak transcription	Psoas Muscle	Psoas
15	chr8:66525600-66545200	Weak transcription	Fetal Kidney	kidney
16	chr8:66526000-66537000	Weak transcription	Gastric	stomach
17	chr8:66526000-66539000	Weak transcription	NHLF	lung
18	chr8:66527600-66535200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr8:66527600-66535600	Strong transcription	Lung	lung
20	chr8:66527600-66537400	Weak transcription	NHDF-Ad	bronchial
21	chr8:66527600-66539600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr8:66528000-66535200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr8:66529200-66535000	Strong transcription	Thymus	Thymus
24	chr8:66529200-66541800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
25	chr8:66529600-66534800	Strong transcription	Brain Germinal Matrix	brain
26	chr8:66529600-66535000	Strong transcription	Stomach Smooth Muscle	stomach
27	chr8:66529600-66537600	Strong transcription	Fetal Stomach	stomach
28	chr8:66529600-66539600	Strong transcription	Fetal Intestine Large	intestine
29	chr8:66529600-66539800	Strong transcription	HUES6 Cell Line	embryonic stem cell
30	chr8:66529600-66540200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr8:66529600-66540400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr8:66529600-66541800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr8:66529800-66535000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr8:66529800-66535000	Strong transcription	Primary T cells from cord blood	blood
35	chr8:66529800-66535000	Strong transcription	Fetal Brain Female	brain
36	chr8:66529800-66535000	Strong transcription	Rectal Mucosa Donor 29	rectum
37	chr8:66529800-66535200	Strong transcription	Primary neutrophils fromperipheralblood	blood
38	chr8:66529800-66535200	Strong transcription	Liver	Liver
39	chr8:66529800-66535200	Strong transcription	Skeletal Muscle Male	skeletal muscle
40	chr8:66529800-66535400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
41	chr8:66529800-66535400	Strong transcription	Placenta	Placenta
42	chr8:66529800-66539600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr8:66529800-66539600	Strong transcription	Fetal Muscle Leg	muscle
44	chr8:66529800-66539800	Strong transcription	HUES48 Cell Line	embryonic stem cell
45	chr8:66529800-66540000	Strong transcription	HUES64 Cell Line	embryonic stem cell
46	chr8:66529800-66540000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
47	chr8:66529800-66540000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
48	chr8:66529800-66540000	Strong transcription	Primary T helper cells fromperipheralblood	blood
49	chr8:66529800-66540200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr8:66529800-66540400	Strong transcription	Monocytes-CD14+_RO01746	blood

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