Variant report

Variant rs112970560
Chromosome Location chr21:46859877-46859878
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46855000-46866000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr21:46855000-46873800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr21:46857800-46860600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr21:46857800-46868000 Weak transcription H9 Cell Line embryonic stem cell
5 chr21:46857800-46868000 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr21:46858200-46860000 Enhancers Fetal Heart heart
7 chr21:46858200-46860200 Enhancers Spleen Spleen
8 chr21:46858400-46860200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr21:46858600-46860000 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr21:46858800-46860000 Enhancers Primary B cells from peripheral blood blood
11 chr21:46858800-46860000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr21:46858800-46860800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
13 chr21:46859200-46860000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr21:46859200-46860000 Enhancers iPS-18 Cell Line embryonic stem cell
15 chr21:46859200-46860600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr21:46859200-46861000 Weak transcription A549 lung
17 chr21:46859200-46867600 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr21:46859400-46860000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr21:46859400-46860000 Enhancers GM12878-XiMat blood
20 chr21:46859400-46861000 Enhancers Fetal Muscle Leg muscle
21 chr21:46859400-46862400 Enhancers Liver Liver
22 chr21:46859400-46873400 Weak transcription Gastric stomach
23 chr21:46859600-46860000 Bivalent Enhancer Primary T cells fromperipheralblood blood
24 chr21:46859600-46860000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr21:46859600-46860000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr21:46859600-46860000 Enhancers Brain Hippocampus Middle brain
27 chr21:46859600-46860000 Enhancers Pancreas Pancrea
28 chr21:46859600-46860000 Enhancers Sigmoid Colon Sigmoid Colon
29 chr21:46859600-46860000 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
30 chr21:46859600-46860200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr21:46859800-46860000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
32 chr21:46859800-46860000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr21:46859800-46860000 Enhancers Adipose Nuclei Adipose
34 chr21:46859800-46860000 Enhancers Rectal Smooth Muscle rectum
35 chr21:46859800-46860000 Enhancers HepG2 liver
36 chr21:46859800-46860200 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr21:46859800-46860800 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr21:46859800-46860800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr21:46859800-46860800 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr21:46859800-46861000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr21:46859800-46861400 Enhancers Fetal Muscle Trunk muscle
42 chr21:46859800-46861800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr21:46859800-46861800 Weak transcription Right Atrium heart
44 chr21:46859800-46862000 Weak transcription Right Ventricle heart
45 chr21:46859800-46863800 Weak transcription NHLF lung
46 chr21:46859800-46864000 Weak transcription Brain Substantia Nigra brain
47 chr21:46859800-46867600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr21:46859800-46867800 Weak transcription H1 Cell Line embryonic stem cell
49 chr21:46859800-46872200 Weak transcription Duodenum Mucosa Duodenum
50 chr21:46859800-46874200 Weak transcription Ovary ovary

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