Variant report

Variant rs113187885
Chromosome Location chr17:59477413-59477414
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59473400-59479800 Bivalent Enhancer Primary T cells fromperipheralblood blood
2 chr17:59474200-59479000 Active TSS Aorta Aorta
3 chr17:59474200-59481000 Active TSS NHDF-Ad bronchial
4 chr17:59474400-59479800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr17:59475000-59479200 Active TSS HSMM muscle
6 chr17:59475000-59480400 Bivalent/Poised TSS Fetal Intestine Small intestine
7 chr17:59475400-59478800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr17:59475400-59479600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
9 chr17:59475800-59478200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
10 chr17:59475800-59479400 Active TSS Osteobl bone
11 chr17:59476000-59478000 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
12 chr17:59476000-59478200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
13 chr17:59476200-59478000 Active TSS A549 lung
14 chr17:59476200-59478200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
15 chr17:59476200-59478200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
16 chr17:59476200-59478200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
17 chr17:59476200-59478200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
18 chr17:59476200-59478200 Bivalent/Poised TSS Fetal Intestine Large intestine
19 chr17:59476200-59478400 Active TSS Hela-S3 cervix
20 chr17:59476200-59478600 Active TSS Breast Myoepithelial Primary Cells Breast
21 chr17:59476200-59478600 Active TSS Muscle Satellite Cultured Cells --
22 chr17:59476200-59478600 Active TSS Fetal Kidney kidney
23 chr17:59476200-59478800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr17:59476200-59479000 Active TSS HSMMtube muscle
25 chr17:59476200-59479600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr17:59476400-59477600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr17:59476400-59478000 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr17:59476400-59478000 Active TSS Fetal Lung lung
29 chr17:59476400-59478000 Active TSS NHLF lung
30 chr17:59476400-59478200 Active TSS Pancreatic Islets Pancreatic Islet
31 chr17:59476400-59478200 Active TSS Rectal Mucosa Donor 31 rectum
32 chr17:59476400-59478200 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
33 chr17:59476400-59478400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
34 chr17:59476400-59478600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr17:59476400-59478600 Bivalent/Poised TSS Thymus Thymus
36 chr17:59476400-59479000 Active TSS Ovary ovary
37 chr17:59476400-59479400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr17:59476600-59477800 Enhancers Liver Liver
39 chr17:59476600-59478000 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
40 chr17:59476600-59478000 Bivalent/Poised TSS Fetal Muscle Trunk muscle
41 chr17:59476600-59478200 Bivalent/Poised TSS Fetal Stomach stomach
42 chr17:59476600-59478400 Bivalent Enhancer Primary mononuclear cells fromperipheralblood Blood
43 chr17:59476600-59480600 Active TSS Right Atrium heart
44 chr17:59476800-59477600 Enhancers Gastric stomach
45 chr17:59476800-59477800 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
46 chr17:59476800-59477800 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
47 chr17:59476800-59477800 Bivalent/Poised TSS Esophagus oesophagus
48 chr17:59476800-59478000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr17:59476800-59478000 Active TSS Adipose Nuclei Adipose
50 chr17:59476800-59478000 Bivalent/Poised TSS HMEC breast

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