Variant report

Variant	rs11319980
Chromosome Location	chr4:76947851-76947852
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353539	chr4:76530136-76993859	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
2	nsv529613	chr4:76654941-77081576	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	nsv1004627	chr4:76793910-76999584	Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
4	esv3342370	chr4:76947428-76950226	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv2427313	chr4:76947776-76949452	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv2583724	chr4:76947851-76947851	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv2286882	chr4:76947851-76947852	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:76944800-76949200	Weak transcription	Fetal Lung	lung
2	chr4:76944800-76949600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr4:76945000-76949200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr4:76945200-76949600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr4:76945400-76949200	Weak transcription	Adipose Nuclei	Adipose
6	chr4:76945400-76949200	Weak transcription	Liver	Liver
7	chr4:76945400-76949600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr4:76945600-76949200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr4:76945600-76949600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr4:76945800-76949200	Weak transcription	Primary B cells from peripheral blood	blood
11	chr4:76945800-76949200	Weak transcription	Primary T helper cells fromperipheralblood	blood
12	chr4:76945800-76949400	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chr4:76945800-76949600	Weak transcription	Primary T helper cells PMA-I stimulated	--
14	chr4:76946000-76949600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr4:76946200-76949200	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr4:76946200-76949200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr4:76946400-76949200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr4:76946400-76949400	Weak transcription	Primary hematopoietic stem cells	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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