Variant report

Variant	rs113229508
Chromosome Location	chr20:24388712-24388713
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv9793	chr20:23939613-24734850	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1058146	chr20:24210196-24531087	Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv833946	chr20:24320375-24490702	Enhancers Bivalent Enhancer Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3521655	chr20:24388002-24390600	Bivalent Enhancer Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv3521654	chr20:24388373-24390335	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv3521653	chr20:24388564-24389701	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3521657	chr20:24388587-24389669	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3454232	chr20:24388588-24389683	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3454231	chr20:24388609-24389655	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3521656	chr20:24388634-24389616	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3454229	chr20:24388635-24389626	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:24384000-24390200	Weak transcription	Fetal Brain Female	brain
2	chr20:24387600-24388800	Enhancers	Lung	lung
3	chr20:24387800-24392400	Weak transcription	Fetal Thymus	thymus
4	chr20:24388200-24390000	Weak transcription	Dnd41	blood
5	chr20:24388400-24389600	Weak transcription	Fetal Kidney	kidney
6	chr20:24388400-24390400	Weak transcription	Brain Substantia Nigra	brain
7	chr20:24388600-24389800	Weak transcription	Primary T cells from cord blood	blood
8	chr20:24388600-24391800	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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