Variant report

Variant	rs1132424
Chromosome Location	chr1:219653868-219653869
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10115382	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10491698	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1075038	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10811642	0.88[ASN][1000 genomes]
rs10811646	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs12337667	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12346597	0.83[ASN][1000 genomes]
rs1535842	0.86[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9657609	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832625	chr1:219637041-219825998	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:219653600-219654400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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