| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1010123 |
chr3:18990307-19989504 |
Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1004602 |
chr3:19031671-19930052 |
Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv536511 |
chr3:19031671-19930052 |
Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv948636 |
chr3:19335802-19856585 |
Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3386719 |
chr3:19454588-19895807 |
Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers
|
Chromatin interactive regionlncRNAmiRNA target site
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv876595 |
chr3:19512074-19726308 |
Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer
|
Chromatin interactive regionlncRNAmiRNA target site
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv3718 |
chr3:19520852-19565669 |
Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv1009097 |
chr3:19539647-19787978 |
Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS
|
Chromatin interactive regionlncRNAmiRNA target site
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv1833163 |
chr3:19547184-19861406 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS
|
Chromatin interactive regionlncRNAmiRNA target site
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv433358 |
chr3:19547184-19996508 |
Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv1828161 |
chr3:19547184-20062060 |
Flanking Active TSS Genic enhancers Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
17 gene(s)
|
inside rSNPs
|
diseases
|
