Variant report

Variant	rs11347002
Chromosome Location	chr12:10245159-10245160
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898757	chr12:10229281-10614641	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv826239	chr12:10244497-10249249	Flanking Active TSS Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2539849	chr12:10245159-10245159	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
4	esv1953933	chr12:10245159-10245160	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
5	esv1437703	chr12:10245160-10245161	Weak transcription Enhancers	n/a	n/a	n/a	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10222800-10248400	Weak transcription	Psoas Muscle	Psoas
2	chr12:10228600-10247200	Weak transcription	HUVEC	blood vessel
3	chr12:10237000-10246200	Weak transcription	Adipose Nuclei	Adipose
4	chr12:10242800-10253800	Weak transcription	Brain Hippocampus Middle	brain
5	chr12:10243000-10245600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr12:10243000-10246000	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr12:10243200-10246200	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr12:10243200-10247200	Weak transcription	Right Atrium	heart
9	chr12:10243800-10245600	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr12:10244400-10246000	Weak transcription	GM12878-XiMat	blood
11	chr12:10244800-10245200	Enhancers	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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