Variant report

Variant	rs113528838
Chromosome Location	chr14:64266283-64266284
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:64265952..64266822-chr14:64460521..64461407,3	MCF-7	breast:
2	chr14:64265985..64266560-chr14:64769846..64770485,2	MCF-7	breast:
3	chr14:64258294..64260685-chr14:64264198..64267177,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915909	chr14:63620440-64560369	Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv1048645	chr14:64057327-64283872	Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
3	nsv1038825	chr14:64109441-64491720	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
4	nsv564902	chr14:64230089-64280206	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv1037140	chr14:64248421-64442980	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv542119	chr14:64248421-64442980	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
7	nsv564903	chr14:64248549-64266899	Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3416242	chr14:64263248-64321769	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
9	esv3386310	chr14:64265248-64316735	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64254600-64275200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:64255400-64270000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:64256200-64272200	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr14:64265600-64266400	Enhancers	Placenta	Placenta
5	chr14:64265800-64266600	Active TSS	HepG2	liver
6	chr14:64266200-64266400	Enhancers	Fetal Muscle Trunk	muscle
7	chr14:64266200-64266400	Enhancers	HMEC	breast
8	chr14:64266200-64266400	Enhancers	HUVEC	blood vessel
9	chr14:64266200-64266400	Active TSS	NHEK	skin
10	chr14:64266200-64266600	Active TSS	Muscle Satellite Cultured Cells	--
11	chr14:64266200-64266600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr14:64266200-64266600	Active TSS	Duodenum Smooth Muscle	Duodenum
13	chr14:64266200-64266600	Active TSS	Rectal Mucosa Donor 31	rectum
14	chr14:64266200-64266600	Active TSS	Hela-S3	cervix
15	chr14:64266200-64266600	Active TSS	Osteobl	bone
16	chr14:64266200-64266800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr14:64266200-64266800	Enhancers	Primary B cells from peripheral blood	blood
18	chr14:64266200-64266800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr14:64266200-64266800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr14:64266200-64266800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr14:64266200-64266800	Active TSS	Adipose Nuclei	Adipose
22	chr14:64266200-64266800	Active TSS	Duodenum Mucosa	Duodenum
23	chr14:64266200-64266800	Active TSS	Right Atrium	heart
24	chr14:64266200-64266800	Active TSS	A549	lung
25	chr14:64266200-64266800	Active TSS	NHDF-Ad	bronchial
26	chr14:64266200-64267000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr14:64266200-64267000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
28	chr14:64266200-64267000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr14:64266200-64267000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr14:64266200-64267000	Active TSS	Aorta	Aorta
31	chr14:64266200-64267000	Active TSS	Rectal Mucosa Donor 29	rectum
32	chr14:64266200-64267000	Enhancers	Dnd41	blood
33	chr14:64266200-64267000	Active TSS	NHLF	lung
34	chr14:64266200-64267200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr14:64266200-64267200	Active TSS	Skeletal Muscle Female	skeletal muscle

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