Variant report

Variant	rs113609892
Chromosome Location	chr8:130213862-130213863
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891445	chr8:130152109-130224721	Enhancers ZNF genes & repeats Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv831460	chr8:130185680-130366217	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv612229	chr8:130213203-130252229	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130205400-130214600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:130208200-130241600	Weak transcription	Thymus	Thymus
3	chr8:130209600-130214600	Weak transcription	Fetal Stomach	stomach
4	chr8:130209800-130214600	Weak transcription	Ovary	ovary
5	chr8:130210000-130215000	Genic enhancers	Dnd41	blood
6	chr8:130210000-130216600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr8:130211400-130215400	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr8:130211800-130214400	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr8:130213400-130214400	Weak transcription	NHDF-Ad	bronchial
10	chr8:130213400-130215000	Enhancers	K562	blood
11	chr8:130213600-130215600	Enhancers	Fetal Muscle Leg	muscle
12	chr8:130213800-130214000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
13	chr8:130213800-130214200	Genic enhancers	Fetal Thymus	thymus
14	chr8:130213800-130215600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr8:130213800-130215600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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