Variant report

Variant	rs113708003
Chromosome Location	chr10:49775304-49775305
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:49761230..49763552-chr10:49773026..49775938,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895371	chr10:49492075-50232180	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv895372	chr10:49576878-49933488	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	nsv6609	chr10:49770419-49778210	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv550815	chr10:49774633-49794481	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:49757400-49782200	Weak transcription	HSMMtube	muscle
2	chr10:49761600-49780600	Weak transcription	HUVEC	blood vessel
3	chr10:49763200-49780800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:49764400-49777800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr10:49765000-49776400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr10:49766000-49776800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr10:49770800-49777400	Weak transcription	NH-A	brain
8	chr10:49771600-49779000	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr10:49771800-49780200	Strong transcription	Muscle Satellite Cultured Cells	--
10	chr10:49772000-49776800	Strong transcription	Osteobl	bone
11	chr10:49773000-49782600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr10:49773000-49787400	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr10:49773200-49776200	Weak transcription	Brain Substantia Nigra	brain
14	chr10:49773200-49787800	Weak transcription	Brain Angular Gyrus	brain
15	chr10:49773400-49778000	Strong transcription	NHLF	lung
16	chr10:49773400-49786200	Weak transcription	Brain Hippocampus Middle	brain
17	chr10:49773400-49786600	Strong transcription	HSMM	muscle
18	chr10:49773600-49779400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr10:49774000-49775400	Strong transcription	NHDF-Ad	bronchial
20	chr10:49774200-49779400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr10:49774400-49776000	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr10:49774800-49775600	Strong transcription	Aorta	Aorta
23	chr10:49775200-49776600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr10:49775200-49777400	Genic enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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