Variant report

Variant	rs113739844
Chromosome Location	chrY:22596423-22596424
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv930979	chrY:22515425-23165096	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrY:22595000-22596800	Weak transcription	Left Ventricle	heart
2	chrY:22595200-22596800	Enhancers	Dnd41	blood
3	chrY:22595200-22599400	Weak transcription	Right Ventricle	heart
4	chrY:22595200-22615800	Weak transcription	Aorta	Aorta
5	chrY:22595400-22597000	Weak transcription	Spleen	Spleen
6	chrY:22595400-22598200	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chrY:22595600-22597200	Weak transcription	Pancreas	Pancrea
8	chrY:22596400-22598600	Weak transcription	Gastric	stomach

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links