Variant report

Variant	rs113895212
Chromosome Location	chr14:70721408-70721409
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:70716825..70718477-chr14:70720427..70722449,2	MCF-7	breast:
2	chr14:70519745..70521992-chr14:70721079..70723653,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832826	chr14:70559589-70723464	Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv826972	chr14:70717268-70726035	Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv3402532	chr14:70721349-70722397	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70721000-70721600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
2	chr14:70721000-70722000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr14:70721000-70722200	Active TSS	HUES48 Cell Line	embryonic stem cell
4	chr14:70721000-70722200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr14:70721000-70722200	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr14:70721000-70722200	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
7	chr14:70721000-70722200	Active TSS	HepG2	liver
8	chr14:70721000-70722600	Active TSS	HUES64 Cell Line	embryonic stem cell
9	chr14:70721000-70722800	Active TSS	H1 Cell Line	embryonic stem cell
10	chr14:70721000-70722800	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
11	chr14:70721000-70724000	Active TSS	ES-I3 Cell Line	embryonic stem cell
12	chr14:70721200-70721600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr14:70721200-70721600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr14:70721200-70721600	Active TSS	iPS-18 Cell Line	embryonic stem cell
15	chr14:70721200-70721600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr14:70721200-70721600	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr14:70721200-70721600	Bivalent/Poised TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
19	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
20	chr14:70721200-70721600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
21	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
22	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Primary T helper cells fromperipheralblood	blood
23	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr14:70721200-70721600	Bivalent/Poised TSS	Muscle Satellite Cultured Cells	--
25	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
26	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr14:70721200-70721600	Flanking Active TSS	Adipose Nuclei	Adipose
29	chr14:70721200-70721600	Active TSS	Aorta	Aorta
30	chr14:70721200-70721600	Bivalent/Poised TSS	Brain Angular Gyrus	brain
31	chr14:70721200-70721600	Bivalent/Poised TSS	Brain Anterior Caudate	brain
32	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Brain Inferior Temporal Lobe	brain
33	chr14:70721200-70721600	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
34	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Esophagus	oesophagus
35	chr14:70721200-70721600	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
36	chr14:70721200-70721600	Bivalent/Poised TSS	Placenta Amnion	Placenta Amnion
37	chr14:70721200-70721600	Bivalent/Poised TSS	Thymus	Thymus
38	chr14:70721200-70721600	Flanking Active TSS	HMEC	breast
39	chr14:70721200-70721600	Bivalent/Poised TSS	HSMM	muscle
40	chr14:70721200-70721600	Active TSS	NHLF	lung
41	chr14:70721200-70721800	Active TSS	Pancreas	Pancrea
42	chr14:70721200-70721800	Active TSS	Right Atrium	heart
43	chr14:70721200-70721800	Active TSS	Skeletal Muscle Female	skeletal muscle
44	chr14:70721200-70722000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr14:70721200-70722000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr14:70721200-70722000	Active TSS	Primary hematopoietic stem cells	blood
47	chr14:70721200-70722000	Bivalent/Poised TSS	Primary T killer naive cells fromperipheralblood	blood
48	chr14:70721200-70722000	Bivalent/Poised TSS	Brain Germinal Matrix	brain
49	chr14:70721200-70722000	Active TSS	Colonic Mucosa	Colon
50	chr14:70721200-70722000	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum

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