| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1063125 |
chr18:12046892-12918251 |
Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
130 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv491873 |
chr18:12159445-12739784 |
Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
79 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv909400 |
chr18:12201374-12585545 |
Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
67 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv909401 |
chr18:12211483-12312075 |
Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
31 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv909402 |
chr18:12211483-12325222 |
Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
31 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv960253 |
chr18:12230993-12234582 |
Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv909403 |
chr18:12231060-12325222 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
30 gene(s)
|
inside rSNPs
|
diseases
|
