Variant report

Variant	rs114106086
Chromosome Location	chr8:130017342-130017343
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv437633	chr8:130014200-130022257	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv891442	chr8:130016499-130130604	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130016400-130017400	Weak transcription	Fetal Muscle Leg	muscle
2	chr8:130016600-130018400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr8:130017000-130018000	Enhancers	HSMM	muscle
4	chr8:130017000-130018200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:130017000-130018200	Enhancers	Muscle Satellite Cultured Cells	--
6	chr8:130017000-130018200	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr8:130017000-130018400	Enhancers	HSMMtube	muscle
8	chr8:130017000-130019600	Enhancers	HMEC	breast
9	chr8:130017200-130017600	Enhancers	Fetal Brain Female	brain
10	chr8:130017200-130017600	Enhancers	Fetal Stomach	stomach
11	chr8:130017200-130017800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr8:130017200-130017800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr8:130017200-130017800	Enhancers	Brain Hippocampus Middle	brain
14	chr8:130017200-130018000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:130017200-130018000	Enhancers	NH-A	brain
16	chr8:130017200-130018000	Enhancers	Osteobl	bone
17	chr8:130017200-130018200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr8:130017200-130018200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr8:130017200-130018400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr8:130017200-130018400	Enhancers	NHDF-Ad	bronchial
21	chr8:130017200-130019400	Genic enhancers	Dnd41	blood
22	chr8:130017200-130019800	Enhancers	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links