Variant report

Variant	rs114153598
Chromosome Location	chr4:46911583-46911584
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:46911550-46911600	GM12892	blood:	n/a
2	chr4:46911550-46911600	HMEC	breast:	n/a
3	chr4:46911550-46911600	AG09319	gingival:	n/a
4	chr4:46911550-46911600	HNPCEpiC	eye:	n/a
5	chr4:46911550-46911600	A549	lung:	n/a
6	chr4:46911550-46911600	HepG2	liver:	n/a
7	chr4:46911550-46911600	AoSMC	blood vessel:	n/a
8	chr4:46911550-46911600	Hepatocyte	liver:	n/a
9	chr4:46911550-46911600	MCF-7	breast:	n/a
10	chr4:46911550-46911600	SKMC	muscle:	n/a
11	chr4:46911550-46911600	GM12891	blood:	n/a
12	chr4:46911550-46911600	NH-A	brain:	n/a
13	chr4:46911550-46911600	IMR90	lung:	fetal
14	chr4:46911550-46911600	ovcar-3	ovarian:	n/a
15	chr4:46911550-46911600	GM19239	blood:	n/a
16	chr4:46911550-46911600	NHBE	bronchial:	n/a
17	chr4:46911550-46911600	PFSK-1	brain:	n/a
18	chr4:46911550-46911600	HCM	heart:	n/a
19	chr4:46911550-46911600	ProgFib	skin:	n/a
20	chr4:46911550-46911600	PrEC	prostate:	n/a
21	chr4:46911550-46911600	NHDF-neo	bronchial:	n/a
22	chr4:46911550-46911600	HIPEpiC	eye:	n/a
23	chr4:46911550-46911600	PANC-1	pancreas:	n/a
24	chr4:46911550-46911600	HAEpiC	amniotic membrane:	n/a
25	chr4:46911550-46911600	HCT-116	colon:	n/a
26	chr4:46911550-46911600	GM12878	blood:	n/a
27	chr4:46911550-46911600	HL-60	blood:	n/a
28	chr4:46911550-46911600	H1-hESC	embryonic stem cell:	embryo
29	chr4:46911550-46911600	SK-N-MC	brain:	n/a
30	chr4:46911550-46911600	BE2_C	brain:	n/a
31	chr4:46911550-46911600	HCF	heart:	n/a
32	chr4:46911550-46911600	SK-N-SH_RA	brain:	n/a
33	chr4:46911550-46911600	AG04449	skin:	fetal
34	chr4:46911550-46911600	T-47D	breast:	n/a
35	chr4:46911550-46911600	HRE	kidney:	n/a
36	chr4:46911550-46911600	AG09309	skin:	n/a
37	chr4:46911550-46911600	HEEpiC	esophagus:	n/a
38	chr4:46911550-46911600	NT2-D1	testis:	n/a
39	chr4:46911550-46911600	ECC-1	luminal epithelium:	n/a
40	chr4:46911550-46911600	SAEC	small airway:	n/a
41	chr4:46911550-46911600	AG04450	lung:	fetal
42	chr4:46911550-46911600	MCF10A-Er-Src	breast:	n/a
43	chr4:46911550-46911600	HUVEC	blood vessel:	n/a
44	chr4:46911550-46911600	BJ	skin:	n/a
45	chr4:46911550-46911600	HPAEpiC	pulmonary alveolar:	n/a
46	chr4:46911550-46911600	HRPEpiC	eye:	n/a
47	chr4:46911550-46911600	Caco-2	colon:	n/a
48	chr4:46911550-46911600	HEK293	kidney:	embryo
49	chr4:46911550-46911600	K562	blood:	n/a
50	chr4:46911550-46911600	HRCEpiC	kidney:	n/a

No data

Variant related genes	Relation type
COX7B2	CpG island

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879002	chr4:46911379-46940376	Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links