Variant report

Variant	rs114272969
Chromosome Location	chr1:159209865-159209866
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872487	chr1:159196765-159342439	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv946448	chr1:159209579-159211067	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:159199600-159211800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:159208800-159210200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:159208800-159210600	Enhancers	HMEC	breast
4	chr1:159209000-159210000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr1:159209000-159210600	Enhancers	NHEK	skin
6	chr1:159209000-159211000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr1:159209200-159210200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr1:159209200-159210200	Enhancers	HUVEC	blood vessel
9	chr1:159209200-159210400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr1:159209400-159210000	Enhancers	Hela-S3	cervix
11	chr1:159209800-159210000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:159209800-159210000	Flanking Active TSS	GM12878-XiMat	blood
13	chr1:159209800-159211000	Enhancers	Primary monocytes fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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