The 2.0 version of rSNPBase

Variant report

Variant rs11452442
Chromosome Location chr6:25585763-25585764
allele -/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:25471600-25597200 Weak transcription Gastric stomach
2 chr6:25516800-25606400 Weak transcription Lung lung
3 chr6:25522400-25588600 Weak transcription HMEC breast
4 chr6:25538600-25592800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr6:25541600-25612000 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr6:25544000-25593600 Weak transcription Fetal Lung lung
7 chr6:25547200-25600600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:25556200-25618000 Weak transcription Primary B cells from cord blood blood
9 chr6:25557200-25591400 Weak transcription Ovary ovary
10 chr6:25572000-25622200 Weak transcription HSMMtube muscle
11 chr6:25574200-25594200 Weak transcription H9 Cell Line embryonic stem cell
12 chr6:25577000-25590600 Weak transcription Brain Angular Gyrus brain
13 chr6:25577200-25592000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr6:25577200-25594200 Weak transcription Brain Substantia Nigra brain
15 chr6:25577200-25603400 Weak transcription Fetal Brain Female brain
16 chr6:25577200-25624800 Weak transcription Adipose Nuclei Adipose
17 chr6:25577600-25597200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr6:25579200-25604600 Weak transcription Fetal Brain Male brain
19 chr6:25579600-25588600 Weak transcription Primary hematopoietic stem cells blood
20 chr6:25579600-25593200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:25580000-25588400 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr6:25580000-25590000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr6:25580200-25597800 Weak transcription Hela-S3 cervix
24 chr6:25580200-25599000 Weak transcription NHEK skin
25 chr6:25580400-25592600 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr6:25580600-25608600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr6:25580600-25610200 Weak transcription Primary T cells fromperipheralblood blood
28 chr6:25580800-25599600 Weak transcription Small Intestine intestine
29 chr6:25581000-25587800 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr6:25581200-25622800 Weak transcription Colonic Mucosa Colon
31 chr6:25582000-25594400 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr6:25582000-25611400 Weak transcription Brain Anterior Caudate brain
33 chr6:25582000-25626800 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr6:25582400-25622200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr6:25582600-25590400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr6:25582800-25594400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr6:25583200-25586200 Weak transcription Fetal Intestine Large intestine
38 chr6:25583200-25600600 Weak transcription Placenta Placenta
39 chr6:25583400-25592000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr6:25583600-25588000 Weak transcription Duodenum Mucosa Duodenum
41 chr6:25583600-25588600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:25583600-25590200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr6:25583600-25598600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr6:25583600-25623200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr6:25583800-25591600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr6:25583800-25623200 Weak transcription Esophagus oesophagus
47 chr6:25584400-25597400 Weak transcription NHDF-Ad bronchial
48 chr6:25584600-25591400 Weak transcription Fetal Intestine Small intestine
49 chr6:25584800-25591400 Weak transcription Aorta Aorta
50 chr6:25585000-25585800 Strong transcription Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015