Variant report

Variant	rs114910402
Chromosome Location	chr6:74469441-74469442
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:74468333..74470305-chr6:74471399..74473230,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027968	chr6:74155378-74521923	Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
2	nsv538305	chr6:74155378-74521923	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
3	nsv1023250	chr6:74189642-74605976	Strong transcription Weak transcription Genic enhancers Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	172 gene(s)	inside rSNPs	diseases
4	nsv538306	chr6:74189642-74605976	Strong transcription Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	172 gene(s)	inside rSNPs	diseases
5	nsv463154	chr6:74412048-74775904	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
6	nsv603695	chr6:74412048-74775904	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
7	nsv527906	chr6:74468860-74475047	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv528148	chr6:74468860-74493432	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:74414800-74474600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr6:74425200-74475800	Weak transcription	Hela-S3	cervix
3	chr6:74425400-74483200	Weak transcription	A549	lung
4	chr6:74435800-74475400	Weak transcription	Primary T cells from cord blood	blood
5	chr6:74438400-74527200	Weak transcription	Esophagus	oesophagus
6	chr6:74441400-74473200	Weak transcription	HUVEC	blood vessel
7	chr6:74441400-74544400	Weak transcription	Aorta	Aorta
8	chr6:74442200-74473400	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr6:74442400-74493400	Weak transcription	Fetal Muscle Trunk	muscle
10	chr6:74443400-74484000	Weak transcription	Left Ventricle	heart
11	chr6:74444000-74498600	Weak transcription	Fetal Muscle Leg	muscle
12	chr6:74444400-74474600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr6:74448800-74483400	Weak transcription	NHEK	skin
14	chr6:74453600-74479400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr6:74456800-74483800	Weak transcription	NHLF	lung
16	chr6:74457200-74472400	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr6:74457200-74484000	Weak transcription	Adipose Nuclei	Adipose
18	chr6:74457400-74475400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr6:74457800-74477600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr6:74461400-74474000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr6:74461600-74472800	Weak transcription	HMEC	breast
22	chr6:74461800-74472600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr6:74461800-74473600	Weak transcription	Primary hematopoietic stem cells	blood
24	chr6:74463000-74472200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr6:74463800-74473200	Weak transcription	Colon Smooth Muscle	Colon
26	chr6:74465200-74484800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr6:74467400-74486200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr6:74468000-74492200	Weak transcription	Primary T helper cells PMA-I stimulated	--
29	chr6:74468400-74469600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr6:74468400-74469600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr6:74468600-74469800	Strong transcription	Monocytes-CD14+_RO01746	blood
32	chr6:74468800-74470400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr6:74469000-74469800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
34	chr6:74469200-74469600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr6:74469400-74469800	Enhancers	Fetal Lung	lung
36	chr6:74469400-74469800	Active TSS	NHDF-Ad	bronchial
37	chr6:74469400-74470000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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