The 2.0 version of rSNPBase

Variant report

Variant rs11495588
Chromosome Location chr12:62907202-62907203
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62863200-62937400 Weak transcription Pancreas Pancrea
2 chr12:62863400-62911000 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr12:62863600-62926400 Weak transcription Colon Smooth Muscle Colon
4 chr12:62866600-62912400 Weak transcription NHLF lung
5 chr12:62866600-62953200 Weak transcription Psoas Muscle Psoas
6 chr12:62871000-62910800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr12:62871800-62926200 Weak transcription Fetal Brain Male brain
8 chr12:62874600-62917400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr12:62876000-62937400 Weak transcription Gastric stomach
10 chr12:62876200-62913000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr12:62879000-62912000 Weak transcription Brain Angular Gyrus brain
12 chr12:62886000-62911200 Weak transcription Brain Substantia Nigra brain
13 chr12:62889200-62949600 Weak transcription Small Intestine intestine
14 chr12:62892800-62911200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr12:62894400-62926200 Weak transcription NH-A brain
16 chr12:62897000-62916400 Weak transcription Fetal Heart heart
17 chr12:62897600-62931000 Weak transcription K562 blood
18 chr12:62897600-62944000 Weak transcription Esophagus oesophagus
19 chr12:62897800-62911200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr12:62898000-62923400 Weak transcription NHDF-Ad bronchial
21 chr12:62898600-62912800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr12:62900600-62909600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr12:62901200-62909000 Strong transcription Cortex derived primary cultured neurospheres brain
24 chr12:62901800-62907800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr12:62902400-62911200 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr12:62902400-62929200 Weak transcription Rectal Smooth Muscle rectum
27 chr12:62902600-62912200 Weak transcription Brain Cingulate Gyrus brain
28 chr12:62902600-62913200 Weak transcription Ovary ovary
29 chr12:62902600-62926600 Weak transcription Stomach Smooth Muscle stomach
30 chr12:62902600-62927000 Weak transcription Colonic Mucosa Colon
31 chr12:62903600-62908000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr12:62903600-62909000 Weak transcription Fetal Kidney kidney
33 chr12:62903600-62912400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr12:62903600-62917000 Weak transcription HepG2 liver
35 chr12:62903600-62918800 Weak transcription Osteobl bone
36 chr12:62903600-62926200 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr12:62903600-62926200 Weak transcription Primary T cells fromperipheralblood blood
38 chr12:62903600-62926200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr12:62903600-62949800 Weak transcription NHEK skin
40 chr12:62903800-62911200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr12:62903800-62924400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr12:62903800-62926200 Weak transcription Hela-S3 cervix
43 chr12:62904200-62910800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr12:62904400-62908400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:62904400-62908600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr12:62904400-62912000 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr12:62904400-62915800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr12:62904400-62926200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr12:62904600-62926200 Weak transcription HMEC breast
50 chr12:62904600-62927000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015