The 2.0 version of rSNPBase

Variant report

Variant rs1149600
Chromosome Location chr11:76478854-76478855
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:76470200-76479000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr11:76470600-76482000 Weak transcription Psoas Muscle Psoas
3 chr11:76473600-76483200 Enhancers Esophagus oesophagus
4 chr11:76473800-76479200 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr11:76474000-76481000 Enhancers Fetal Muscle Trunk muscle
6 chr11:76474000-76481200 Enhancers Spleen Spleen
7 chr11:76474000-76485600 Enhancers Left Ventricle heart
8 chr11:76474400-76485400 Enhancers Fetal Muscle Leg muscle
9 chr11:76475000-76480800 Enhancers Fetal Brain Male brain
10 chr11:76475200-76479000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr11:76475200-76479000 Weak transcription K562 blood
12 chr11:76475400-76479000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr11:76475400-76479000 Weak transcription Rectal Smooth Muscle rectum
14 chr11:76475400-76479200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr11:76475400-76479200 Weak transcription NHDF-Ad bronchial
16 chr11:76475400-76479400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr11:76475400-76481800 Weak transcription Colon Smooth Muscle Colon
18 chr11:76475600-76479800 Weak transcription Brain Anterior Caudate brain
19 chr11:76475800-76479000 Weak transcription HSMM muscle
20 chr11:76475800-76479000 Weak transcription Osteobl bone
21 chr11:76476000-76479000 Weak transcription H9 Cell Line embryonic stem cell
22 chr11:76476000-76479000 Weak transcription HUVEC blood vessel
23 chr11:76476200-76485600 Enhancers Fetal Intestine Large intestine
24 chr11:76476400-76479000 Weak transcription Gastric stomach
25 chr11:76476400-76479200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr11:76476400-76484400 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr11:76476400-76485200 Enhancers Fetal Intestine Small intestine
28 chr11:76476800-76479000 Enhancers Adipose Nuclei Adipose
29 chr11:76477200-76479000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr11:76477200-76479000 Weak transcription NH-A brain
31 chr11:76477200-76480000 Transcr. at gene 5' and 3' A549 lung
32 chr11:76477400-76479200 Weak transcription Fetal Brain Female brain
33 chr11:76477400-76484000 Weak transcription Aorta Aorta
34 chr11:76477600-76479000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr11:76477600-76479000 Weak transcription Fetal Kidney kidney
36 chr11:76477600-76479000 Weak transcription Pancreas Pancrea
37 chr11:76477600-76480600 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr11:76477800-76479000 Enhancers Rectal Mucosa Donor 31 rectum
39 chr11:76477800-76479200 Enhancers HepG2 liver
40 chr11:76477800-76480200 Bivalent Enhancer Primary T cells fromperipheralblood blood
41 chr11:76478000-76479000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr11:76478000-76479000 Enhancers Hela-S3 cervix
43 chr11:76478000-76479000 Weak transcription HSMMtube muscle
44 chr11:76478000-76479200 Bivalent Enhancer Fetal Stomach stomach
45 chr11:76478000-76480800 Flanking Active TSS Liver Liver
46 chr11:76478000-76481200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr11:76478200-76479000 Enhancers Stomach Smooth Muscle stomach
48 chr11:76478200-76479000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
49 chr11:76478200-76479200 Bivalent Enhancer Primary monocytes fromperipheralblood blood
50 chr11:76478200-76480000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015