Variant report

Variant	rs115055477
Chromosome Location	chr6:144469030-144469031
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024333	chr6:144468065-144502824	Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:144463000-144470600	Weak transcription	GM12878-XiMat	blood
2	chr6:144463200-144470600	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr6:144466400-144470800	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr6:144466600-144469400	Weak transcription	NHEK	skin
5	chr6:144466600-144470600	Genic enhancers	Primary neutrophils fromperipheralblood	blood
6	chr6:144467000-144470800	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr6:144467000-144470800	Weak transcription	HUVEC	blood vessel
8	chr6:144467400-144470000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr6:144467600-144470400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr6:144468200-144470800	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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