Variant report

Variant	rs115174010
Chromosome Location	chr5:57959628-57959629
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2830363	chr5:57893949-58555491	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv1029145	chr5:57905821-58141221	Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv830311	chr5:57912546-58105636	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1020937	chr5:57938969-57959918	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv4845	chr5:57949493-57994156	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2760929	chr5:57952586-57959954	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv437464	chr5:57954311-57961405	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv437465	chr5:57954311-57961405	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv965588	chr5:57954339-57961148	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3469257	chr5:57954495-57960793	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3515411	chr5:57954645-57960643	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3515410	chr5:57955107-57960290	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3515407	chr5:57955145-57960543	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv1815069	chr5:57956072-57961405	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv2763882	chr5:57956826-57960198	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57957800-57961000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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