Variant report

Variant	rs115257220
Chromosome Location	chr14:71152626-71152627
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:71150935..71153106-chr14:71165634..71167400,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527969	chr14:71150421-71155984	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv275293	chr14:71151777-71155720	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71133200-71173000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:71134600-71158600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:71141000-71160800	Weak transcription	Primary T cells from cord blood	blood
4	chr14:71142800-71153600	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr14:71143000-71177800	Weak transcription	Primary B cells from cord blood	blood
6	chr14:71151400-71153000	Enhancers	NHEK	skin
7	chr14:71151400-71154600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr14:71151800-71154600	Enhancers	H9 Cell Line	embryonic stem cell
9	chr14:71152000-71153000	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr14:71152000-71153000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr14:71152000-71153000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr14:71152000-71153200	Enhancers	HSMMtube	muscle
13	chr14:71152000-71154000	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr14:71152000-71154600	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr14:71152200-71152800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr14:71152200-71153000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr14:71152200-71153200	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr14:71152200-71153400	Enhancers	H1 Cell Line	embryonic stem cell
19	chr14:71152200-71153400	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr14:71152200-71153400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr14:71152200-71154400	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr14:71152200-71154600	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr14:71152200-71154600	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr14:71152600-71153200	Enhancers	Brain Germinal Matrix	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links