Variant report

Variant	rs115257398
Chromosome Location	chr1:179516749-179516750
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522746	chr1:179501365-179518459	Weak transcription Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv523253	chr1:179516072-179518459	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179510600-179520600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:179514000-179518200	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr1:179515400-179516800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr1:179515400-179517800	Weak transcription	Fetal Muscle Leg	muscle
5	chr1:179515600-179521800	Enhancers	Placenta	Placenta
6	chr1:179516000-179517800	Weak transcription	Pancreas	Pancrea
7	chr1:179516600-179516800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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