| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv2761872 |
chr15:56211065-56426501 |
Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv833018 |
chr15:56325799-56492535 |
Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1045906 |
chr15:56333180-56473614 |
Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv3312198 |
chr15:56362260-56367158 |
Enhancers Weak transcription ZNF genes & repeats Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
n/a
|
| 5 |
nsv522888 |
chr15:56362968-56369124 |
Enhancers Weak transcription Active TSS ZNF genes & repeats
|
TF binding regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
n/a
|
| 6 |
esv3414428 |
chr15:56363060-56366358 |
Weak transcription Active TSS Enhancers ZNF genes & repeats
|
TF binding regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
n/a
|
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Last update: Aug 31, 2015