Variant report

Variant	rs11551214
Chromosome Location	chr11:63527401-63527402
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:63526116..63528464-chr11:63528882..63530638,2	K562	blood:
2	chr11:63525704..63527853-chr11:63578506..63580593,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ATL3-1	chr11:63527369-63529844	NONHSAT021901

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051171	chr11:62987064-63835715	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv832183	chr11:63416678-63564565	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	nsv468589	chr11:63515752-63713239	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
4	nsv555180	chr11:63515752-63713239	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
5	nsv975941	chr11:63526220-63527444	Weak transcription Strong transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63473000-63529400	Weak transcription	Right Ventricle	heart
2	chr11:63491000-63529600	Weak transcription	Pancreas	Pancrea
3	chr11:63492800-63528000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr11:63501800-63530000	Weak transcription	Psoas Muscle	Psoas
5	chr11:63506200-63527600	Weak transcription	Fetal Brain Male	brain
6	chr11:63509000-63534800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr11:63511000-63534800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr11:63511200-63529800	Weak transcription	Stomach Mucosa	stomach
9	chr11:63513600-63528400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr11:63513800-63529200	Weak transcription	Fetal Heart	heart
11	chr11:63514400-63528400	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr11:63514400-63528800	Strong transcription	Monocytes-CD14+_RO01746	blood
13	chr11:63515000-63529800	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr11:63515800-63527600	Weak transcription	Fetal Lung	lung
15	chr11:63515800-63529200	Strong transcription	Primary neutrophils fromperipheralblood	blood
16	chr11:63516000-63534800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr11:63516400-63528400	Strong transcription	Adipose Nuclei	Adipose
18	chr11:63516400-63533400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr11:63516400-63534200	Weak transcription	Primary B cells from peripheral blood	blood
20	chr11:63516600-63528600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr11:63516600-63533800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
22	chr11:63516800-63530000	Weak transcription	Esophagus	oesophagus
23	chr11:63517000-63527600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr11:63517400-63530000	Weak transcription	Placenta Amnion	Placenta Amnion
25	chr11:63518800-63527600	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr11:63518800-63530000	Weak transcription	Aorta	Aorta
27	chr11:63519200-63527600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr11:63519400-63528000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr11:63519400-63534800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
30	chr11:63520400-63533400	Weak transcription	GM12878-XiMat	blood
31	chr11:63520600-63528000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr11:63520800-63529000	Weak transcription	Rectal Smooth Muscle	rectum
33	chr11:63520800-63529400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr11:63520800-63529400	Weak transcription	NHEK	skin
35	chr11:63520800-63529600	Weak transcription	Colonic Mucosa	Colon
36	chr11:63521200-63528000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr11:63521200-63528000	Weak transcription	HSMM	muscle
38	chr11:63521200-63528600	Weak transcription	Ovary	ovary
39	chr11:63521200-63529000	Weak transcription	Colon Smooth Muscle	Colon
40	chr11:63521200-63529400	Weak transcription	Brain Substantia Nigra	brain
41	chr11:63521200-63534600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
42	chr11:63521400-63529400	Weak transcription	Brain Anterior Caudate	brain
43	chr11:63521400-63529600	Weak transcription	NH-A	brain
44	chr11:63521400-63534400	Weak transcription	Primary B cells from cord blood	blood
45	chr11:63521400-63534800	Weak transcription	Primary T helper cells fromperipheralblood	blood
46	chr11:63521600-63527600	Weak transcription	Muscle Satellite Cultured Cells	--
47	chr11:63521600-63527800	Weak transcription	HMEC	breast
48	chr11:63522800-63528000	Weak transcription	K562	blood
49	chr11:63523400-63527600	Strong transcription	Fetal Brain Female	brain
50	chr11:63523400-63528400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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