| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv869971 |
chr7:117420583-118274149 |
Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
40 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv889088 |
chr7:117744660-117913648 |
Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
25 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv889089 |
chr7:117865940-117921267 |
Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv889090 |
chr7:117865940-118067460 |
Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv889091 |
chr7:117899190-117963926 |
Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv966730 |
chr7:117901893-117906091 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
n/a
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015