Variant report

Variant	rs11554784
Chromosome Location	chr4:1244682-1244683
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:20)
CpG islands
(count:0)
Chromatin interactive
region (count:16)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:20 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:1244458-1245058	MCF10A-Er-Src	breast:	n/a	n/a
2	POLR2A	chr4:1240624-1244947	GM12878	blood:	n/a	n/a
3	POLR2A	chr4:1239447-1245326	K562	blood:	n/a	n/a
4	POLR2A	chr4:1244590-1245227	ECC-1	luminal epithelium:	n/a	n/a
5	POLR2A	chr4:1239852-1245445	GM12892	blood:	n/a	n/a
6	POLR2A	chr4:1244638-1244948	MCF-7	breast:	n/a	n/a
7	POLR2A	chr4:1239867-1245313	HepG2	liver:	n/a	n/a
8	POLR2A	chr4:1244296-1244730	GM12878	blood:	n/a	n/a
9	POLR2A	chr4:1238878-1245469	GM12878	blood:	n/a	n/a
10	POLR2A	chr4:1240747-1245005	HepG2	liver:	n/a	n/a
11	POLR2A	chr4:1239998-1245234	Raji	blood:	n/a	n/a
12	POLR2A	chr4:1244250-1245439	GM12892	blood:	n/a	n/a
13	POLR2A	chr4:1239891-1245200	K562	blood:	n/a	n/a
14	POLR2A	chr4:1244680-1245341	MCF-7	breast:	n/a	n/a
15	POLR2A	chr4:1241720-1245130	MCF10A-Er-Src	breast:	n/a	n/a
16	POLR2A	chr4:1244443-1244684	GM12878	blood:	n/a	n/a
17	MAX	chr4:1241758-1244863	HepG2	liver:	n/a	n/a
18	MAX	chr4:1241049-1244691	HepG2	liver:	n/a	chr4:1241594-1241604 chr4:1241554-1241564 chr4:1241434-1241443 chr4:1241433-1241443
19	POLR2A	chr4:1242935-1245630	SK-N-MC	brain:	n/a	n/a
20	POLR2A	chr4:1239817-1245060	GM12878	blood:	n/a	n/a

No data

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:1218830..1221524-chr4:1242783..1244802,2	MCF-7	breast:
2	chr4:1241391..1244976-chr4:1289369..1292052,3	MCF-7	breast:
3	chr4:1158166..1163360-chr4:1238498..1245354,13	MCF-7	breast:
4	chr4:1242036..1244791-chr4:1580291..1583222,3	MCF-7	breast:
5	chr4:1236833..1250005-chr4:1276188..1292579,54	MCF-7	breast:
6	chr4:1236808..1249320-chr4:1336333..1343819,66	MCF-7	breast:
7	chr4:1240883..1245378-chr4:1339091..1342291,13	K562	blood:
8	chr4:1242091..1248517-chr4:1279714..1285424,16	MCF-7	breast:
9	chr4:1217670..1219491-chr4:1243014..1244747,2	K562	blood:
10	chr4:1159229..1162099-chr4:1242725..1245069,2	K562	blood:
11	chr4:1240390..1245150-chr4:1578422..1582537,5	MCF-7	breast:
12	chr4:1235141..1249133-chr4:1336906..1347308,118	MCF-7	breast:
13	chr4:1239502..1245378-chr4:1336996..1344860,21	K562	blood:
14	chr4:1242011..1244764-chr6:161122775..161125242,2	MCF-7	breast:
15	chr4:1238004..1248980-chr4:1275065..1286840,30	K562	blood:
16	chr4:1238004..1246805-chr4:1279798..1288475,25	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C4orf42-1	chr4:1244314-1245224	ENSG00000196810.4
2	lnc-C4orf42-1	chr4:1244047-1249698	ENSG00000196810.4
3	lnc-C4orf42-1	chr4:1243899-1246795	NONHSAT094687
4	lnc-C4orf42-1	chr4:1243899-1246244	NONHSAT094690

No data

Variant related genes	Relation type
CTBP1-AS2	TF binding region
CTBP1	TF binding region
ENSG00000159692	Chromatin interaction
ENSG00000090316	Chromatin interaction
ENSG00000122194	Chromatin interaction
ENSG00000163945	Chromatin interaction
ENSG00000273179	Chromatin interaction
ENSG00000244459	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11733130	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv3339080	chr4:970630-1546223	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
4	nsv829835	chr4:1097586-1304239	Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
5	nsv878328	chr4:1141573-1990425	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
6	nsv878329	chr4:1147407-1254930	Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv878330	chr4:1147407-1523930	Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
8	nsv878331	chr4:1159680-1254930	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
9	nsv461152	chr4:1159680-1415698	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
10	nsv593278	chr4:1159680-1415698	Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
11	nsv461153	chr4:1174861-1254930	Genic enhancers Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
12	nsv593279	chr4:1174861-1254930	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
13	nsv461154	chr4:1179213-1254930	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
14	nsv593280	chr4:1179213-1254930	Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
15	nsv878332	chr4:1179213-1254930	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
16	nsv997971	chr4:1191256-1518521	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
17	nsv878333	chr4:1193832-1254930	Enhancers Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
18	nsv461155	chr4:1203265-1352685	Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
19	nsv593281	chr4:1203265-1352685	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
20	nsv1002097	chr4:1212573-1320086	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
21	nsv536986	chr4:1212573-1320086	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
22	esv1811773	chr4:1228251-1287474	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
23	esv1800629	chr4:1228451-1287274	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
24	esv1812851	chr4:1228451-1287274	Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
25	esv1823612	chr4:1228451-1287274	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
26	esv1825633	chr4:1228451-1287274	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
27	esv1838677	chr4:1231540-1274734	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
28	nsv822433	chr4:1232688-1246206	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
29	nsv878334	chr4:1232910-1254930	Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
30	esv1839490	chr4:1237014-1254930	Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
31	nsv878335	chr4:1237014-1254930	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
32	nsv878336	chr4:1238859-1254930	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
33	nsv878337	chr4:1240091-1254930	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
34	esv3338577	chr4:1240652-1245250	Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
35	nsv593287	chr4:1240962-1245277	Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
36	esv3325724	chr4:1241677-1244875	ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
37	esv1837719	chr4:1241752-1245277	Weak transcription Active TSS Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
38	esv1839051	chr4:1241752-1245277	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
39	esv1841123	chr4:1241752-1245277	Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
40	esv1837491	chr4:1241969-1259650	Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
41	nsv593297	chr4:1243286-1245386	Genic enhancers Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
42	nsv593298	chr4:1244267-1342521	Flanking Active TSS Strong transcription Genic enhancers Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:115 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:1243400-1244800	Transcr. at gene 5' and 3'	Dnd41	blood
2	chr4:1243400-1245000	Flanking Active TSS	Stomach Smooth Muscle	stomach
3	chr4:1243600-1245000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
4	chr4:1243600-1245400	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
5	chr4:1243600-1245400	ZNF genes & repeats	Fetal Intestine Large	intestine
6	chr4:1243600-1248000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr4:1243800-1245000	Enhancers	Spleen	Spleen
8	chr4:1243800-1245200	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr4:1243800-1245800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr4:1243800-1247400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr4:1243800-1248200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
12	chr4:1244000-1244800	Enhancers	Primary B cells from cord blood	blood
13	chr4:1244000-1244800	Enhancers	Primary hematopoietic stem cells	blood
14	chr4:1244000-1244800	Enhancers	Gastric	stomach
15	chr4:1244000-1245000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
16	chr4:1244000-1245000	Enhancers	Stomach Mucosa	stomach
17	chr4:1244000-1245400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
18	chr4:1244000-1245400	ZNF genes & repeats	HSMM	muscle
19	chr4:1244000-1245600	ZNF genes & repeats	A549	lung
20	chr4:1244000-1245800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr4:1244000-1245800	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr4:1244000-1245800	Enhancers	Fetal Brain Male	brain
23	chr4:1244000-1246000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
24	chr4:1244000-1246800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
25	chr4:1244000-1247200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
26	chr4:1244000-1247200	ZNF genes & repeats	Fetal Intestine Small	intestine
27	chr4:1244000-1247400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
28	chr4:1244000-1247400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
29	chr4:1244000-1247400	ZNF genes & repeats	Placenta	Placenta
30	chr4:1244000-1247600	ZNF genes & repeats	Fetal Stomach	stomach
31	chr4:1244200-1244800	Enhancers	Primary B cells from peripheral blood	blood
32	chr4:1244200-1244800	Enhancers	Primary T cells from cord blood	blood
33	chr4:1244200-1244800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
34	chr4:1244200-1244800	Enhancers	Primary T killer memory cells from peripheral blood	blood
35	chr4:1244200-1244800	Weak transcription	Aorta	Aorta
36	chr4:1244200-1244800	Enhancers	Brain Angular Gyrus	brain
37	chr4:1244200-1244800	Enhancers	Brain Anterior Caudate	brain
38	chr4:1244200-1244800	Enhancers	Duodenum Smooth Muscle	Duodenum
39	chr4:1244200-1244800	Enhancers	Small Intestine	intestine
40	chr4:1244200-1245000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
41	chr4:1244200-1245000	Enhancers	Colon Smooth Muscle	Colon
42	chr4:1244200-1245000	Enhancers	Lung	lung
43	chr4:1244200-1245000	Enhancers	Sigmoid Colon	Sigmoid Colon
44	chr4:1244200-1245400	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
45	chr4:1244200-1245400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
46	chr4:1244200-1245400	Enhancers	Left Ventricle	heart
47	chr4:1244200-1245400	Enhancers	Ovary	ovary
48	chr4:1244200-1245600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr4:1244200-1245800	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
50	chr4:1244200-1245800	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin02	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links