Variant report

Variant rs11564382
Chromosome Location chr18:25707069-25707070
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25695400-25708400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr18:25696200-25727800 Weak transcription HSMMtube muscle
3 chr18:25696600-25715800 Weak transcription HUVEC blood vessel
4 chr18:25697000-25708200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr18:25697800-25715600 Weak transcription Dnd41 blood
6 chr18:25698200-25708000 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr18:25702000-25708400 Weak transcription Left Ventricle heart
8 chr18:25702000-25708400 Weak transcription Right Ventricle heart
9 chr18:25702000-25712000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr18:25703200-25707400 Enhancers Liver Liver
11 chr18:25703800-25727600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr18:25703800-25730000 Weak transcription Aorta Aorta
13 chr18:25704000-25708000 Enhancers HepG2 liver
14 chr18:25704200-25708200 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr18:25704800-25708400 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr18:25704800-25710200 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr18:25705000-25707800 Weak transcription Brain Angular Gyrus brain
18 chr18:25705000-25709800 Weak transcription Brain Substantia Nigra brain
19 chr18:25705000-25727800 Weak transcription Ovary ovary
20 chr18:25705200-25707800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr18:25705200-25708000 Weak transcription HSMM muscle
22 chr18:25705200-25708400 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr18:25705200-25708400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr18:25705200-25710000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr18:25705200-25710000 Weak transcription Brain Anterior Caudate brain
26 chr18:25705200-25710000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr18:25705200-25710200 Weak transcription Brain Cingulate Gyrus brain
28 chr18:25705200-25710200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr18:25705200-25727400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr18:25705400-25707600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr18:25705400-25707800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr18:25705400-25708000 Weak transcription Muscle Satellite Cultured Cells --
33 chr18:25705600-25707600 Weak transcription Osteobl bone
34 chr18:25705600-25708800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr18:25705800-25711800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr18:25706600-25707800 Strong transcription NH-A brain
37 chr18:25706600-25713000 Enhancers Brain Germinal Matrix brain
38 chr18:25706800-25707200 Enhancers Right Atrium heart
39 chr18:25706800-25707600 Enhancers A549 lung
40 chr18:25706800-25713200 Enhancers Fetal Heart heart
41 chr18:25707000-25708400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr18:25707000-25708400 Weak transcription Pancreas Pancrea
43 chr18:25707000-25709800 Weak transcription Fetal Brain Female brain
44 chr18:25707000-25712200 Weak transcription Fetal Brain Male brain

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