No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv533223 |
chr5:924201-1544459 |
Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
87 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv917123 |
chr5:965332-1528792 |
Strong transcription Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
81 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv1023100 |
chr5:1149132-1558039 |
Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
59 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv537604 |
chr5:1149132-1558039 |
Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
59 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv1033213 |
chr5:1198042-1483573 |
Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
29 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv537605 |
chr5:1198042-1483573 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
29 gene(s)
|
inside rSNPs
|
diseases
|
7 |
nsv880418 |
chr5:1286516-1473977 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
24 gene(s)
|
inside rSNPs
|
diseases
|
8 |
nsv830187 |
chr5:1318106-1509826 |
Genic enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
23 gene(s)
|
inside rSNPs
|
diseases
|
9 |
nsv482682 |
chr5:1324469-1487909 |
Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
10 |
nsv881664 |
chr5:1377172-1594879 |
Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
36 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv461909 |
chr5:1411412-1468287 |
Bivalent/Poised TSS Weak transcription Strong transcription Bivalent Enhancer Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv596857 |
chr5:1411412-1468287 |
Strong transcription Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
13 |
nsv880402 |
chr5:1412645-1473977 |
Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
14 |
esv1819949 |
chr5:1420801-1448148 |
Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
15 |
esv1817050 |
chr5:1422602-1463051 |
Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Enhancers Genic enhancers Flanking Active TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
16 |
nsv461910 |
chr5:1423905-1468287 |
Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
17 |
nsv596858 |
chr5:1423905-1468287 |
Strong transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
18 |
nsv881100 |
chr5:1438354-1473977 |
Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
19 |
esv3381160 |
chr5:1444302-1447700 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
20 |
nsv596866 |
chr5:1445379-1447841 |
Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
21 |
esv1844723 |
chr5:1445379-1470900 |
Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Genic enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|