Variant report

Variant	rs115656626
Chromosome Location	chr15:92562241-92562242
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870094	chr15:92367354-92631647	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv534110	chr15:92397220-92592961	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv984212	chr15:92562075-92570410	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:92550800-92562600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr15:92554200-92566200	Enhancers	Right Atrium	heart
3	chr15:92555400-92564200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
4	chr15:92555600-92563200	Enhancers	Brain Cingulate Gyrus	brain
5	chr15:92555600-92563200	Enhancers	Brain Hippocampus Middle	brain
6	chr15:92555600-92564000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr15:92555600-92565600	Weak transcription	Gastric	stomach
8	chr15:92555600-92570600	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr15:92555600-92576200	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr15:92555800-92564200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
11	chr15:92556000-92564200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
12	chr15:92556800-92565000	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr15:92556800-92565200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr15:92557000-92562800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr15:92557800-92567000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr15:92558000-92562600	Enhancers	Spleen	Spleen
17	chr15:92558000-92571200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr15:92558600-92568600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr15:92559000-92562600	Weak transcription	Aorta	Aorta
20	chr15:92559200-92564000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
21	chr15:92559400-92564400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr15:92560800-92563400	Enhancers	Left Ventricle	heart
23	chr15:92561000-92562600	Enhancers	Lung	lung
24	chr15:92561000-92562800	Enhancers	Esophagus	oesophagus
25	chr15:92561000-92562800	Enhancers	Ovary	ovary
26	chr15:92561000-92563400	Enhancers	Right Ventricle	heart
27	chr15:92561400-92565200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
28	chr15:92561600-92562600	Enhancers	Primary T helper cells PMA-I stimulated	--
29	chr15:92561600-92562800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr15:92561600-92563000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr15:92561800-92562400	Enhancers	Brain Anterior Caudate	brain
32	chr15:92561800-92562800	Enhancers	NHEK	skin
33	chr15:92561800-92564400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
34	chr15:92561800-92564600	Enhancers	Pancreas	Pancrea
35	chr15:92561800-92565000	Weak transcription	Brain Angular Gyrus	brain
36	chr15:92562000-92562400	Enhancers	Fetal Heart	heart
37	chr15:92562000-92567800	Weak transcription	Brain Inferior Temporal Lobe	brain
38	chr15:92562200-92563800	Enhancers	Brain Substantia Nigra	brain
39	chr15:92562200-92565000	Weak transcription	Primary T cells fromperipheralblood	blood

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