Variant report

Variant	rs11571158
Chromosome Location	chr11:100996426-100996427
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:100992998..100996575-chr11:101047325..101050411,3	MCF-7	breast:
2	chr11:100820823..100823466-chr11:100993922..100996465,2	K562	blood:
3	chr1:193681603..193683732-chr11:100996114..100998464,2	MCF-7	breast:
4	chr11:100985987..100991412-chr11:100992377..100996760,6	K562	blood:
5	chr11:100995755..100998186-chr17:61027837..61029575,2	MCF-7	breast:
6	chr11:100851290..100854016-chr11:100995188..100997674,2	MCF-7	breast:
7	chr11:100994873..100997835-chr11:101312314..101314341,3	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11571161	1.00[AFR][1000 genomes]
rs11571162	1.00[AFR][1000 genomes]
rs35416901	1.00[AFR][1000 genomes]
rs7114950	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048356	chr11:100713096-101058995	Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv541154	chr11:100713096-101058995	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv556131	chr11:100985777-101480017	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
4	nsv898328	chr11:100993846-101009933	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:100905400-100997600	Weak transcription	Left Ventricle	heart
2	chr11:100975800-100996800	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr11:100991000-100997200	Weak transcription	Right Ventricle	heart
4	chr11:100994000-100996600	Weak transcription	K562	blood
5	chr11:100995600-100996800	Weak transcription	Colon Smooth Muscle	Colon
6	chr11:100995800-100996600	Weak transcription	Aorta	Aorta
7	chr11:100995800-100996600	Weak transcription	Ovary	ovary
8	chr11:100996400-100996600	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
9	chr11:100996400-100996800	Bivalent Enhancer	Fetal Lung	lung
10	chr11:100996400-100999400	Active TSS	Breast Myoepithelial Primary Cells	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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