Variant report

Variant rs11572477
Chromosome Location chr1:217118639-217118640
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:217111000-217125400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:217117600-217119600 Enhancers HUES64 Cell Line embryonic stem cell
3 chr1:217117600-217119800 Enhancers iPS-15b Cell Line embryonic stem cell
4 chr1:217117600-217119800 Enhancers iPS-18 Cell Line embryonic stem cell
5 chr1:217117800-217118800 Enhancers H9 Cell Line embryonic stem cell
6 chr1:217117800-217120800 Enhancers iPS-20b Cell Line embryonic stem cell
7 chr1:217117800-217121200 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr1:217118000-217119200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:217118400-217118800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:217118400-217118800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:217118400-217118800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
12 chr1:217118400-217118800 Enhancers Brain Germinal Matrix brain
13 chr1:217118400-217119200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:217118400-217119400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:217118400-217119600 Weak transcription H1 Cell Line embryonic stem cell
16 chr1:217118400-217120200 Enhancers Cortex derived primary cultured neurospheres brain
17 chr1:217118600-217118800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:217118600-217119000 Weak transcription Brain Anterior Caudate brain
19 chr1:217118600-217119400 Flanking Active TSS HUES48 Cell Line embryonic stem cell

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