Variant report

Variant	rs11573832
Chromosome Location	chr8:119959451-119959452
allele	lengthTooLong
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:119954185..119957500-chr8:119957720..119961384,3	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868916	chr8:119911943-120762250	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	esv2758169	chr8:119943309-120275750	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	esv2759639	chr8:119943309-120275750	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
4	esv2005767	chr8:119959288-119959711	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119945400-119960800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr8:119945600-119960600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr8:119948200-119960200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr8:119948400-119959600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr8:119948400-119960600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:119953400-119963600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr8:119954200-119959600	Strong transcription	Osteobl	bone
8	chr8:119954200-119962600	Weak transcription	Fetal Intestine Large	intestine
9	chr8:119956000-119959600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr8:119956000-119960400	Weak transcription	Fetal Kidney	kidney
11	chr8:119956800-119960600	Weak transcription	HSMMtube	muscle
12	chr8:119957000-119959600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr8:119957200-119959600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr8:119957200-119959600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
15	chr8:119957200-119960200	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr8:119957200-119960400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr8:119958600-119960400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr8:119958600-119960400	Weak transcription	Fetal Lung	lung
19	chr8:119959000-119960400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr8:119959000-119960600	Weak transcription	Aorta	Aorta
21	chr8:119959200-119961800	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr8:119959400-119959600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr8:119959400-119959600	Genic enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr8:119959400-119959600	Genic enhancers	NHDF-Ad	bronchial
25	chr8:119959400-119959600	Active TSS	NHLF	lung
26	chr8:119959400-119960000	Enhancers	HUES6 Cell Line	embryonic stem cell
27	chr8:119959400-119961600	Enhancers	HUES64 Cell Line	embryonic stem cell

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