Variant report

Variant rs11574032
Chromosome Location chr12:48278597-48278598
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48262000-48296800 Weak transcription Aorta Aorta
2 chr12:48265000-48283200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr12:48273800-48278800 Enhancers NHDF-Ad bronchial
4 chr12:48275000-48279800 Enhancers Fetal Intestine Large intestine
5 chr12:48275200-48279200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:48275200-48280000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr12:48275200-48280200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr12:48275600-48278600 Genic enhancers NHEK skin
9 chr12:48275600-48279800 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr12:48275800-48280000 Enhancers Fetal Thymus thymus
11 chr12:48276400-48279600 Flanking Active TSS GM12878-XiMat blood
12 chr12:48277000-48278800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr12:48277000-48280200 Enhancers HMEC breast
14 chr12:48277000-48286200 Weak transcription Right Atrium heart
15 chr12:48277200-48279000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:48277200-48279200 Enhancers Colonic Mucosa Colon
17 chr12:48277200-48279400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr12:48277200-48279400 Enhancers Primary B cells from peripheral blood blood
19 chr12:48277200-48279600 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr12:48277200-48280200 Enhancers Rectal Mucosa Donor 31 rectum
21 chr12:48277200-48289600 Weak transcription Esophagus oesophagus
22 chr12:48277200-48290600 Weak transcription Gastric stomach
23 chr12:48277200-48295000 Weak transcription Rectal Smooth Muscle rectum
24 chr12:48277400-48278800 Enhancers Primary T cells fromperipheralblood blood
25 chr12:48277400-48279000 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr12:48277400-48279000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr12:48277400-48279400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
28 chr12:48277400-48279400 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr12:48277400-48279800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr12:48277400-48279800 Enhancers Primary T helper cells fromperipheralblood blood
31 chr12:48277400-48279800 Enhancers Spleen Spleen
32 chr12:48277400-48280000 Weak transcription Muscle Satellite Cultured Cells --
33 chr12:48277400-48280000 Weak transcription HSMM muscle
34 chr12:48277400-48280400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr12:48277400-48280800 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr12:48277400-48282200 Weak transcription Primary monocytes fromperipheralblood blood
37 chr12:48277600-48278800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr12:48277600-48278800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr12:48277600-48278800 Weak transcription Lung lung
40 chr12:48277600-48279000 Weak transcription Osteobl bone
41 chr12:48277600-48279400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr12:48277600-48279400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr12:48277600-48279800 Enhancers Primary T helper naive cells fromperipheralblood blood
44 chr12:48277600-48279800 Enhancers Primary T regulatory cells fromperipheralblood blood
45 chr12:48277600-48280200 Enhancers Primary T cells from cord blood blood
46 chr12:48277600-48280600 Enhancers Primary T helper cells PMA-I stimulated --
47 chr12:48277600-48281200 Weak transcription HSMMtube muscle
48 chr12:48277600-48282200 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr12:48277600-48287400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr12:48277600-48289000 Weak transcription Hela-S3 cervix

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