The 2.0 version of rSNPBase

Variant report

Variant rs11574860
Chromosome Location chr11:94280731-94280732
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94276600-94281000 Active TSS Aorta Aorta
2 chr11:94276800-94282600 Active TSS Fetal Intestine Large intestine
3 chr11:94277000-94281000 Active TSS Stomach Mucosa stomach
4 chr11:94277000-94283400 Active TSS GM12878-XiMat blood
5 chr11:94278200-94281000 Flanking Active TSS Primary monocytes fromperipheralblood blood
6 chr11:94278200-94281000 Transcr. at gene 5' and 3' Dnd41 blood
7 chr11:94278200-94281200 Enhancers Primary T killer memory cells from peripheral blood blood
8 chr11:94278400-94280800 Enhancers Primary T helper 17 cells PMA-I stimulated --
9 chr11:94278400-94280800 Enhancers Fetal Heart heart
10 chr11:94278400-94283400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr11:94278600-94281000 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr11:94278600-94281000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
13 chr11:94278600-94282400 Enhancers Primary T helper cells PMA-I stimulated --
14 chr11:94278600-94282400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr11:94278800-94281000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
16 chr11:94278800-94281000 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr11:94279000-94280800 Enhancers Skeletal Muscle Male skeletal muscle
18 chr11:94279000-94281000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr11:94279000-94281400 Enhancers Primary T helper cells fromperipheralblood blood
20 chr11:94279200-94280800 Active TSS Rectal Mucosa Donor 29 rectum
21 chr11:94279200-94281000 Active TSS ES-I3 Cell Line embryonic stem cell
22 chr11:94279200-94281200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr11:94279200-94282800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
24 chr11:94279200-94296000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr11:94279400-94280800 Enhancers Brain Substantia Nigra brain
26 chr11:94279400-94281000 Active TSS Fetal Stomach stomach
27 chr11:94279400-94281400 Enhancers Primary T cells from cord blood blood
28 chr11:94279400-94282200 Active TSS Fetal Intestine Small intestine
29 chr11:94279400-94282400 Weak transcription Small Intestine intestine
30 chr11:94279400-94282600 Enhancers Primary mononuclear cells fromperipheralblood Blood
31 chr11:94279400-94287200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr11:94279600-94281000 Enhancers Colon Smooth Muscle Colon
33 chr11:94279600-94281200 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr11:94279600-94281200 Genic enhancers K562 blood
35 chr11:94279600-94284800 Weak transcription Placenta Placenta
36 chr11:94279600-94285800 Weak transcription Fetal Muscle Trunk muscle
37 chr11:94279600-94287200 Weak transcription Ovary ovary
38 chr11:94279600-94290200 Weak transcription HSMM muscle
39 chr11:94279800-94280800 Enhancers Right Atrium heart
40 chr11:94279800-94281000 Flanking Active TSS NHDF-Ad bronchial
41 chr11:94280000-94281200 Enhancers Primary hematopoietic stem cells blood
42 chr11:94280000-94281200 Enhancers Sigmoid Colon Sigmoid Colon
43 chr11:94280000-94281600 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr11:94280200-94280800 Enhancers Adipose Nuclei Adipose
45 chr11:94280200-94280800 Enhancers Brain Germinal Matrix brain
46 chr11:94280200-94280800 Flanking Active TSS Rectal Smooth Muscle rectum
47 chr11:94280200-94281000 Genic enhancers Primary hematopoietic stem cells short term culture blood
48 chr11:94280200-94281200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr11:94280200-94281200 Enhancers NH-A brain
50 chr11:94280200-94281400 Active TSS Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015