The 2.0 version of rSNPBase

Variant report

Variant rs115753850
Chromosome Location chr8:6487944-6487945
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:6458000-6498400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr8:6474200-6505200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr8:6474600-6488800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr8:6474800-6498400 Weak transcription HSMM muscle
5 chr8:6476400-6499000 Weak transcription Brain Angular Gyrus brain
6 chr8:6476400-6502800 Weak transcription Colonic Mucosa Colon
7 chr8:6478200-6494600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr8:6478400-6498400 Weak transcription HMEC breast
9 chr8:6479600-6499800 Weak transcription Aorta Aorta
10 chr8:6480000-6502000 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr8:6480200-6489400 Weak transcription Brain Substantia Nigra brain
12 chr8:6480200-6501800 Weak transcription NHEK skin
13 chr8:6480200-6502000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr8:6480200-6502600 Weak transcription Gastric stomach
15 chr8:6480200-6523800 Weak transcription Fetal Brain Female brain
16 chr8:6480400-6491400 Weak transcription Rectal Smooth Muscle rectum
17 chr8:6480400-6498400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr8:6480400-6499600 Weak transcription Brain Anterior Caudate brain
19 chr8:6480400-6499800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr8:6480400-6499800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr8:6480400-6499800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr8:6480400-6502200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr8:6480400-6505400 Weak transcription Lung lung
24 chr8:6480800-6499600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr8:6481800-6501800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr8:6482000-6501800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr8:6482000-6503600 Weak transcription Esophagus oesophagus
28 chr8:6482200-6501200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr8:6483200-6496200 Weak transcription Pancreas Pancrea
30 chr8:6483800-6504400 Weak transcription Liver Liver
31 chr8:6484000-6500200 Weak transcription Primary T cells fromperipheralblood blood
32 chr8:6484000-6502000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr8:6484000-6502200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr8:6484400-6499800 Weak transcription Brain Hippocampus Middle brain
35 chr8:6484400-6502400 Weak transcription Stomach Smooth Muscle stomach
36 chr8:6484400-6503000 Weak transcription Spleen Spleen
37 chr8:6484400-6503400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr8:6484800-6491800 Weak transcription Primary T cells from cord blood blood
39 chr8:6484800-6496400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr8:6484800-6505200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr8:6485000-6488200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr8:6485000-6499800 Weak transcription Fetal Muscle Leg muscle
43 chr8:6485000-6500400 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr8:6485000-6502800 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr8:6485000-6504400 Weak transcription Fetal Intestine Large intestine
46 chr8:6485200-6494000 Weak transcription Thymus Thymus
47 chr8:6485200-6502000 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr8:6485400-6494800 Weak transcription Dnd41 blood
49 chr8:6485400-6499000 Weak transcription Placenta Placenta
50 chr8:6485400-6499800 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015