Variant report

Variant	rs11579084
Chromosome Location	chr1:225031003-225031004
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10753397	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs10915727	0.92[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs10915728	0.92[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12035448	0.82[ASN][1000 genomes]
rs12404833	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs1892123	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2263439	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs59060615	0.90[AMR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225028600-225039200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr1:225030200-225033200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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