Variant report

Variant rs11580087
Chromosome Location chr1:222014552-222014553
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:222000600-222019000 Weak transcription Lung lung
2 chr1:222005800-222019000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:222008800-222018800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:222010400-222015200 Enhancers Primary B cells from peripheral blood blood
5 chr1:222010600-222015000 Enhancers Primary hematopoietic stem cells blood
6 chr1:222011400-222015000 Enhancers HUVEC blood vessel
7 chr1:222011600-222015600 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr1:222011600-222018800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:222011800-222015600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr1:222011800-222016000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:222012600-222014600 Enhancers Esophagus oesophagus
12 chr1:222012600-222014600 Enhancers Pancreas Pancrea
13 chr1:222012600-222014600 Enhancers Stomach Mucosa stomach
14 chr1:222012600-222015000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:222012600-222015000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:222012600-222015000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:222012600-222015000 Enhancers Hela-S3 cervix
18 chr1:222012600-222015000 Enhancers HMEC breast
19 chr1:222012600-222015000 Enhancers NHEK skin
20 chr1:222012600-222015400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:222012600-222015600 Enhancers HSMMtube muscle
22 chr1:222012600-222015800 Enhancers HSMM muscle
23 chr1:222012800-222014600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:222012800-222014600 Enhancers Placenta Placenta
25 chr1:222012800-222014800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:222012800-222014800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:222012800-222015400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:222012800-222015600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:222012800-222015600 Enhancers NHDF-Ad bronchial
30 chr1:222013000-222015600 Enhancers NHLF lung
31 chr1:222013000-222015800 Enhancers Primary monocytes fromperipheralblood blood
32 chr1:222013000-222015800 Enhancers Muscle Satellite Cultured Cells --
33 chr1:222013200-222015200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:222013400-222014600 Enhancers Adipose Nuclei Adipose
35 chr1:222013400-222015000 Enhancers Fetal Muscle Leg muscle
36 chr1:222013600-222014800 Enhancers GM12878-XiMat blood
37 chr1:222013600-222018800 Weak transcription NH-A brain
38 chr1:222013800-222014600 Enhancers Osteobl bone
39 chr1:222013800-222015400 Enhancers Fetal Lung lung
40 chr1:222014000-222014600 Enhancers Right Atrium heart
41 chr1:222014000-222015400 Enhancers Monocytes-CD14+_RO01746 blood
42 chr1:222014000-222015600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:222014000-222018600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:222014200-222019000 Weak transcription A549 lung
45 chr1:222014400-222022000 Weak transcription Placenta Amnion Placenta Amnion

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