Variant report

Variant rs11585054
Chromosome Location chr1:228104898-228104899
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228075600-228109200 Weak transcription Right Atrium heart
2 chr1:228098600-228108600 Weak transcription Fetal Intestine Small intestine
3 chr1:228098600-228117600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:228098800-228122800 Weak transcription HSMMtube muscle
5 chr1:228099200-228108400 Weak transcription Colon Smooth Muscle Colon
6 chr1:228099400-228108800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:228099400-228122400 Weak transcription HSMM muscle
8 chr1:228100200-228105600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:228100400-228105800 Enhancers Fetal Stomach stomach
10 chr1:228100600-228105000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:228100600-228105400 Enhancers HUES6 Cell Line embryonic stem cell
12 chr1:228100600-228105800 Enhancers Placenta Amnion Placenta Amnion
13 chr1:228100600-228108200 Enhancers Fetal Muscle Leg muscle
14 chr1:228100800-228105600 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:228101200-228110400 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr1:228101400-228105800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:228101400-228111000 Weak transcription Fetal Brain Female brain
18 chr1:228101600-228105800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:228102000-228105400 Weak transcription Right Ventricle heart
20 chr1:228102200-228105200 Enhancers HMEC breast
21 chr1:228102400-228106800 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:228102400-228108600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:228102600-228108400 Enhancers Fetal Muscle Trunk muscle
24 chr1:228103000-228105200 Weak transcription Ovary ovary
25 chr1:228103000-228107400 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr1:228103400-228107400 Weak transcription Pancreas Pancrea
27 chr1:228103600-228105200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:228103600-228106800 Enhancers Brain Hippocampus Middle brain
29 chr1:228103800-228107400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:228103800-228113800 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr1:228103800-228117000 Weak transcription Fetal Intestine Large intestine
32 chr1:228104000-228105400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:228104000-228105400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
34 chr1:228104000-228106400 Enhancers Brain Angular Gyrus brain
35 chr1:228104000-228107000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr1:228104000-228107200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:228104200-228105200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:228104200-228106800 Weak transcription H1 Cell Line embryonic stem cell
39 chr1:228104200-228107400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr1:228104200-228111000 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:228104400-228105200 Enhancers Cortex derived primary cultured neurospheres brain
42 chr1:228104400-228105200 Enhancers Spleen Spleen
43 chr1:228104400-228105400 Enhancers Fetal Heart heart
44 chr1:228104400-228108600 Weak transcription Lung lung
45 chr1:228104600-228105200 Enhancers Placenta Placenta
46 chr1:228104600-228105400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:228104600-228105600 Enhancers Brain Cingulate Gyrus brain
48 chr1:228104600-228105600 Enhancers Brain Inferior Temporal Lobe brain
49 chr1:228104600-228105600 Enhancers Brain Substantia Nigra brain
50 chr1:228104600-228105800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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