Variant report

Variant	rs11586975
Chromosome Location	chr1:47851444-47851445
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:47850084..47851771-chr1:47852483..47854951,2	K562	blood:

rs_ID	r²[population]
rs11211526	0.83[EUR][1000 genomes]
rs17103168	0.83[EUR][1000 genomes]
rs17370386	0.83[EUR][1000 genomes]
rs2622903	0.83[EUR][1000 genomes]
rs2622914	0.82[EUR][1000 genomes]
rs2820986	0.83[EUR][1000 genomes]
rs4926840	0.83[EUR][1000 genomes]

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:47800600-47854600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:47824000-47853800	Weak transcription	Psoas Muscle	Psoas
3	chr1:47827800-47854800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr1:47832200-47854200	Weak transcription	Esophagus	oesophagus
5	chr1:47833200-47852000	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr1:47833600-47854200	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr1:47833600-47854200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr1:47835200-47853400	Weak transcription	NHLF	lung
9	chr1:47835200-47853600	Weak transcription	Fetal Brain Male	brain
10	chr1:47835400-47853200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr1:47836400-47854400	Weak transcription	Brain Cingulate Gyrus	brain
12	chr1:47836600-47852800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr1:47836600-47854800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr1:47837200-47853200	Weak transcription	A549	lung
15	chr1:47839400-47854200	Weak transcription	Pancreas	Pancrea
16	chr1:47839400-47854200	Weak transcription	Right Ventricle	heart
17	chr1:47840000-47853400	Weak transcription	Fetal Intestine Small	intestine
18	chr1:47840200-47854200	Weak transcription	Rectal Smooth Muscle	rectum
19	chr1:47841000-47852000	Weak transcription	Brain Substantia Nigra	brain
20	chr1:47841400-47854200	Weak transcription	Cortex derived primary cultured neurospheres	brain
21	chr1:47841400-47854200	Weak transcription	Brain Angular Gyrus	brain
22	chr1:47841600-47854800	Weak transcription	Brain Hippocampus Middle	brain
23	chr1:47844600-47853800	Weak transcription	Hela-S3	cervix
24	chr1:47845000-47851600	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr1:47845200-47852200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
26	chr1:47845400-47852400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr1:47845400-47854400	Weak transcription	HMEC	breast
28	chr1:47845600-47854400	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr1:47846400-47853400	Weak transcription	Fetal Stomach	stomach
30	chr1:47846800-47852000	Weak transcription	NH-A	brain
31	chr1:47846800-47852600	Weak transcription	Brain Germinal Matrix	brain
32	chr1:47846800-47853200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr1:47846800-47854200	Weak transcription	Gastric	stomach
34	chr1:47847000-47854400	Weak transcription	Colonic Mucosa	Colon
35	chr1:47847000-47854600	Weak transcription	Primary T cells fromperipheralblood	blood
36	chr1:47847000-47854600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
37	chr1:47847200-47852200	Weak transcription	Primary hematopoietic stem cells	blood
38	chr1:47847200-47853000	Weak transcription	NHDF-Ad	bronchial
39	chr1:47847200-47854200	Weak transcription	Brain Anterior Caudate	brain
40	chr1:47847200-47854200	Weak transcription	Skeletal Muscle Male	skeletal muscle
41	chr1:47847400-47853400	Weak transcription	Fetal Lung	lung
42	chr1:47847400-47854200	Weak transcription	Skeletal Muscle Female	skeletal muscle
43	chr1:47847400-47858600	Weak transcription	Muscle Satellite Cultured Cells	--
44	chr1:47847600-47852000	Weak transcription	Primary monocytes fromperipheralblood	blood
45	chr1:47847600-47852200	Weak transcription	Primary T helper cells PMA-I stimulated	--
46	chr1:47847600-47853600	Weak transcription	Rectal Mucosa Donor 31	rectum
47	chr1:47847600-47853600	Weak transcription	Osteobl	bone
48	chr1:47847600-47854200	Weak transcription	Fetal Brain Female	brain
49	chr1:47847600-47854200	Weak transcription	Fetal Kidney	kidney
50	chr1:47847600-47854800	Weak transcription	Stomach Smooth Muscle	stomach

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