Variant report

Variant	rs115961453
Chromosome Location	chr9:26833728-26833729
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026827	chr9:26693515-26904699	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	esv3373096	chr9:26825001-26848031	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
3	esv3379082	chr9:26833715-26833977	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:26822200-26889400	Weak transcription	Psoas Muscle	Psoas
2	chr9:26822600-26846200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr9:26829000-26839400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr9:26829000-26839600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr9:26829000-26840200	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr9:26829000-26840400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr9:26829200-26842200	Weak transcription	Left Ventricle	heart
8	chr9:26830200-26865400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr9:26830400-26833800	Weak transcription	HSMMtube	muscle
10	chr9:26832200-26866800	Weak transcription	Gastric	stomach
11	chr9:26832200-26878400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr9:26832800-26834200	Enhancers	Fetal Kidney	kidney
13	chr9:26833000-26839600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr9:26833200-26834200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr9:26833200-26834200	Enhancers	Fetal Muscle Leg	muscle
16	chr9:26833200-26834200	Enhancers	Ovary	ovary
17	chr9:26833400-26834200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr9:26833400-26834200	Enhancers	NHEK	skin
19	chr9:26833600-26833800	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr9:26833600-26833800	Weak transcription	Right Ventricle	heart
21	chr9:26833600-26834000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr9:26833600-26834200	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr9:26833600-26834200	Enhancers	Muscle Satellite Cultured Cells	--
24	chr9:26833600-26834200	Enhancers	Placenta	Placenta
25	chr9:26833600-26834200	Enhancers	HMEC	breast
26	chr9:26833600-26834400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr9:26833600-26834400	Enhancers	HUES48 Cell Line	embryonic stem cell

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