Variant report

Variant rs115968579
Chromosome Location chr12:51610841-51610842
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51597400-51611000 Weak transcription Primary T cells from cord blood blood
2 chr12:51605000-51611000 Weak transcription Spleen Spleen
3 chr12:51610200-51611000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr12:51610200-51611000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
5 chr12:51610200-51612200 Active TSS H1 Cell Line embryonic stem cell
6 chr12:51610200-51612200 Active TSS HUES48 Cell Line embryonic stem cell
7 chr12:51610200-51612200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
8 chr12:51610200-51612200 Active TSS Muscle Satellite Cultured Cells --
9 chr12:51610200-51612400 Active TSS Fetal Kidney kidney
10 chr12:51610200-51612400 Active TSS Right Ventricle heart
11 chr12:51610200-51612800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr12:51610400-51611000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:51610400-51611000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr12:51610400-51611000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
15 chr12:51610400-51611000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
16 chr12:51610400-51611000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
17 chr12:51610400-51611000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr12:51610400-51611000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr12:51610400-51611000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
20 chr12:51610400-51611000 Flanking Active TSS NH-A brain
21 chr12:51610400-51611200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
22 chr12:51610400-51612200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr12:51610400-51612200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
24 chr12:51610400-51612200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
25 chr12:51610400-51612200 Active TSS A549 lung
26 chr12:51610400-51612200 Active TSS NHEK skin
27 chr12:51610400-51612400 Active TSS Rectal Mucosa Donor 29 rectum
28 chr12:51610400-51612600 Active TSS Ovary ovary
29 chr12:51610400-51612600 Active TSS Psoas Muscle Psoas
30 chr12:51610400-51613000 Active TSS Pancreatic Islets Pancreatic Islet
31 chr12:51610600-51611000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
32 chr12:51610600-51611000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
33 chr12:51610600-51611000 Flanking Active TSS Brain Germinal Matrix brain
34 chr12:51610600-51611000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
35 chr12:51610600-51611000 Flanking Active TSS Fetal Intestine Large intestine
36 chr12:51610600-51611000 Flanking Active TSS Placenta Placenta
37 chr12:51610600-51611000 Flanking Active TSS Fetal Stomach stomach
38 chr12:51610600-51611000 Enhancers GM12878-XiMat blood
39 chr12:51610600-51611000 Flanking Active TSS HUVEC blood vessel
40 chr12:51610600-51611200 Active TSS ES-WA7 Cell Line embryonic stem cell
41 chr12:51610600-51611200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
42 chr12:51610600-51611200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr12:51610600-51611200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr12:51610600-51611200 Flanking Active TSS Fetal Muscle Trunk muscle
45 chr12:51610600-51611200 Flanking Active TSS Fetal Muscle Leg muscle
46 chr12:51610600-51612000 Active TSS HUES6 Cell Line embryonic stem cell
47 chr12:51610600-51612000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
48 chr12:51610600-51612000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr12:51610600-51612000 Weak transcription Fetal Brain Male brain
50 chr12:51610600-51612000 Active TSS NHLF lung

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