Variant report

Variant rs11600628
Chromosome Location chr11:63976027-63976028
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:63959600-63977000 Strong transcription iPS-15b Cell Line embryonic stem cell
2 chr11:63960000-63976200 Strong transcription H1 Cell Line embryonic stem cell
3 chr11:63967400-63976200 Strong transcription Brain Germinal Matrix brain
4 chr11:63970200-63979000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
5 chr11:63971600-63992800 Weak transcription Fetal Kidney kidney
6 chr11:63972000-63980000 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr11:63972000-63990000 Weak transcription Ovary ovary
8 chr11:63972400-63976200 Strong transcription A549 lung
9 chr11:63973000-63976200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr11:63973000-63976400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:63973200-63978600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
12 chr11:63973200-63987800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr11:63973400-63983000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr11:63973600-63976200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
15 chr11:63973600-63993000 Weak transcription Aorta Aorta
16 chr11:63973800-63976400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
17 chr11:63973800-63982600 Weak transcription Hela-S3 cervix
18 chr11:63974000-63976200 Flanking Active TSS HUVEC blood vessel
19 chr11:63974000-63976200 Genic enhancers NHLF lung
20 chr11:63974000-63976600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
21 chr11:63974000-63986400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr11:63974200-63982400 Weak transcription HMEC breast
23 chr11:63974400-63976200 Enhancers NH-A brain
24 chr11:63974400-63986200 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr11:63974800-63977000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
26 chr11:63974800-63987600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr11:63975000-63976200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
28 chr11:63975000-63976200 Genic enhancers Fetal Intestine Small intestine
29 chr11:63975000-63976400 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr11:63975000-63986000 Weak transcription NHEK skin
31 chr11:63975000-63986200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr11:63975000-63988400 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr11:63975200-63976200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
34 chr11:63975200-63976400 Enhancers Stomach Mucosa stomach
35 chr11:63975200-63976600 Flanking Active TSS HSMM muscle
36 chr11:63975200-63977200 Genic enhancers Fetal Stomach stomach
37 chr11:63975200-63978000 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr11:63975200-63979200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr11:63975200-63992600 Weak transcription Brain Angular Gyrus brain
40 chr11:63975400-63976200 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr11:63975400-63976400 Active TSS Duodenum Mucosa Duodenum
42 chr11:63975400-63976600 Genic enhancers Esophagus oesophagus
43 chr11:63975400-63977400 Weak transcription H9 Cell Line embryonic stem cell
44 chr11:63975400-63979000 Weak transcription Liver Liver
45 chr11:63975400-63982600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr11:63975400-63985200 Weak transcription Pancreas Pancrea
47 chr11:63975400-63986400 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr11:63975400-63990200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr11:63975600-63976200 Flanking Active TSS Primary hematopoietic stem cells blood
50 chr11:63975600-63976200 Transcr. at gene 5' and 3' Fetal Thymus thymus

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