Variant report

Variant	rs11605151
Chromosome Location	chr11:83564426-83564427
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11233765	0.98[EUR][1000 genomes]
rs11607326	0.95[EUR][1000 genomes]
rs12295050	0.96[EUR][1000 genomes]
rs2037196	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898017	chr11:83556067-83583324	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv898018	chr11:83556067-83586526	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv898019	chr11:83556067-83602367	ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv898020	chr11:83558738-83602367	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv898021	chr11:83562296-83602367	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv898022	chr11:83562296-83602367	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83550200-83564600	Weak transcription	Brain Cingulate Gyrus	brain
2	chr11:83559800-83566400	Weak transcription	Brain Angular Gyrus	brain
3	chr11:83563000-83564600	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr11:83563200-83564600	Flanking Active TSS	Liver	Liver
5	chr11:83563800-83565600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr11:83564000-83564600	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr11:83564200-83565600	Enhancers	Brain Hippocampus Middle	brain
8	chr11:83564400-83565600	Enhancers	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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