The 2.0 version of rSNPBase

Variant report

Variant rs11605818
Chromosome Location chr11:72546252-72546253
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72533800-72549400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr11:72534000-72549200 Weak transcription H9 Cell Line embryonic stem cell
3 chr11:72534200-72550000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr11:72539800-72547200 Weak transcription HSMM muscle
5 chr11:72540200-72616600 Strong transcription Primary B cells from peripheral blood blood
6 chr11:72540600-72589800 Strong transcription Primary B cells from cord blood blood
7 chr11:72540800-72554000 Weak transcription Colonic Mucosa Colon
8 chr11:72541000-72547200 Weak transcription Primary hematopoietic stem cells blood
9 chr11:72541000-72550800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr11:72541400-72546400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:72541400-72547600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr11:72541400-72549000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr11:72541600-72558400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr11:72541800-72548600 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr11:72541800-72548800 Weak transcription Fetal Brain Female brain
16 chr11:72542000-72549400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr11:72542000-72553000 Weak transcription Gastric stomach
18 chr11:72542200-72547800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr11:72542200-72548200 Enhancers Fetal Heart heart
20 chr11:72542200-72548600 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr11:72542400-72546400 Enhancers Adipose Nuclei Adipose
22 chr11:72542400-72546600 Enhancers Brain Angular Gyrus brain
23 chr11:72542400-72547800 Enhancers Fetal Lung lung
24 chr11:72542800-72548000 Enhancers Left Ventricle heart
25 chr11:72543000-72551600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr11:72543000-72556400 Weak transcription K562 blood
27 chr11:72543200-72546400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr11:72543200-72546400 Weak transcription HSMMtube muscle
29 chr11:72543200-72547200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr11:72543200-72548400 Weak transcription Fetal Brain Male brain
31 chr11:72543200-72548400 Weak transcription Placenta Amnion Placenta Amnion
32 chr11:72543200-72548800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr11:72543200-72549000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr11:72543200-72549200 Weak transcription Pancreas Pancrea
35 chr11:72543200-72550600 Weak transcription Hela-S3 cervix
36 chr11:72543200-72552600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr11:72543200-72555600 Strong transcription Fetal Thymus thymus
38 chr11:72543200-72556800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr11:72543200-72558200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr11:72543200-72562200 Weak transcription A549 lung
41 chr11:72543200-72614800 Weak transcription Psoas Muscle Psoas
42 chr11:72543400-72547000 Weak transcription HUVEC blood vessel
43 chr11:72543400-72547200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr11:72543400-72548600 Weak transcription Rectal Smooth Muscle rectum
45 chr11:72543400-72549200 Weak transcription HMEC breast
46 chr11:72543400-72560800 Strong transcription GM12878-XiMat blood
47 chr11:72543400-72603000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr11:72543600-72546400 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr11:72543600-72547400 Weak transcription Primary T cells fromperipheralblood blood
50 chr11:72543600-72548400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015